ENSTNIG00000004116 (Tetraodon nigroviridis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTNIG00000004116 T216421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSTNIG00000004116
M02105_2.00
Tetraodon nigroviridis
TTAATTAG

CTAATTAA
PBM
Weirauch et al.(2014)
pTH6772
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFHX3
M01849_2.00
Homo sapiens
NNNRMTNDN

NHNAKYNNN
PBM
Weirauch et al.(2014)
pTH6494
0.759 0.667
Q4RRY4_TETNG
M02169_2.00
Tetraodon nigroviridis
NNYAATYAN

NTRATTRNN
PBM
Weirauch et al.(2014)
pTH6326
0.602 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02105_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000006733 Homeodomain 985 1041

Links

Other Homeodomain family TFs
Other Tetraodon nigroviridis TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFHX3 Homo sapiens ENSG00000140836 D 0.759
snap_masked-nMf.1.1.scaf16341-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf16341-processed-gene-0.2 I 0.702
HPLM_0000198901 Haemonchus placei HPLM_0000198901 I 0.664
gw.45.264.1 Branchiostoma floridae gw.45.264.1 I 0.658
EFV59755 Trichinella spiralis EFV59755 I 0.631
D917_09007 Trichinella nativa D917_09007 I 0.631
ML03151a Mnemiopsis leidyi ML03151a I 0.628
ENSPSIG00000017976 Pelodiscus sinensis ENSPSIG00000017976 I 0.623
ENSMEUG00000004940 Macropus eugenii ENSMEUG00000004940 I 0.623
SEBOX Monodelphis domestica ENSMODG00000019242 I 0.623
ENSSHAG00000012656 Sarcophilus harrisii ENSSHAG00000012656 I 0.623
Sakowv30040609m.g Saccoglossus kowalevskii Sakowv30040609m.g I 0.622
PIIN_03573 Piriformospora indica PIIN_03573 I 0.612
MhA1_Contig899.frz3.gene1 Meloidogyne hapla MhA1_Contig899.frz3.gene1 I 0.607
PHOX2B Loxodonta africana ENSLAFG00000022070 I 0.607
SMUV_0000169601 Syphacia muris SMUV_0000169601 I 0.604
EVEC_0001106101 Enterobius vermicularis EVEC_0001106101 I 0.604
EVEC_0001081301 Enterobius vermicularis EVEC_0001081301 I 0.604
HelroG148597 Helobdella robusta HelroG148597 I 0.602
Q4RRY4_TETNG Tetraodon nigroviridis Q4RRY4_TETNG D 0.602
ENSTRUG00000012518 Takifugu rubripes ENSTRUG00000012518 I 0.602