ENSTNIG00000004116 (Tetraodon nigroviridis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTNIG00000004116 T216421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSTNIG00000004116
M02105_2.00		 Tetraodon nigroviridis
TTAATTAG
CTAATTAA		 PBM
Weirauch et al.(2014)
pTH6772		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFHX3
M01849_2.00 		Homo sapiens
NNNRMTNDN
NHNAKYNNN		 PBM
Weirauch et al.(2014)
pTH6494 		0.759 0.667
Q4RRY4_TETNG
M02169_2.00 		Tetraodon nigroviridis
NNYAATYAN
NTRATTRNN		 PBM
Weirauch et al.(2014)
pTH6326 		0.602 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02105_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000006733 Homeodomain 985 1041

Links

Other Homeodomain family TFs
Other Tetraodon nigroviridis TFs

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21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action