DBX1 (Tetraodon nigroviridis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTNIG00000004855 T216428_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Dbx1
M00451_2.00 		Mus musculus
WTTAATTA
TAATTAAW		 PBM
Berger et al.(2008)
Dbx1_3486 		0.865 0.911
Dbx2
M00499_2.00 		Mus musculus
NNDTNNN
NNNAHNN		 PBM
Berger et al.(2008)
Dbx2_3487 		0.829 0.804
Dbx
M02128_2.00 		Drosophila melanogaster
WTTAATTA
TAATTAAW		 PBM
Weirauch et al.(2014)
pTH6051 		0.816 0.821
Dbx
M06550_2.00 		Drosophila melanogaster
TTWATKA
TMATWAA		 B1H
Mathelier et al.(2014)
MA0174.1 		0.816 0.821
Hlx
M00485_2.00 		Mus musculus
NNNAWND
HNWTNNN		 PBM
Berger et al.(2008)
Hlx1_2350 		0.732 0.661
H2.0
M06489_2.00 		Drosophila melanogaster
WTWATDA
THATWAW		 B1H
Mathelier et al.(2014)
MA0448.1 		0.731 0.679
H2.0
M06250_2.00 		Drosophila melanogaster
TWWWWDA
THAWWWA		 B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170 		0.731 0.679
H2.0
M06251_2.00 		Drosophila melanogaster
WTWATTRN
NYAATWAW		 B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170 		0.731 0.679
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007515 Homeodomain 179 234

Links

Other Homeodomain family TFs
Other Tetraodon nigroviridis TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000001676 Ficedula albicollis ENSFALG00000001676 I 0.865
DBX1 Sus scrofa ENSSSCG00000013350 I 0.865
DBX1 Equus caballus ENSECAG00000019994 I 0.865
ENSSHAG00000011774 Sarcophilus harrisii ENSSHAG00000011774 I 0.865
DBX1 Felis catus ENSFCAG00000028654 I 0.865
ENSGACG00000000220 Gasterosteus aculeatus ENSGACG00000000220 I 0.865
Dbx1 Rattus norvegicus ENSRNOG00000014706 I 0.865
DBX1 Homo sapiens ENSG00000109851 I 0.865
ENSSTOG00000015557 Ictidomys tridecemlineatus ENSSTOG00000015557 I 0.865
DBX1 Taeniopygia guttata ENSTGUG00000015791 I 0.865
dbx1b Danio rerio ENSDARG00000001859 I 0.865
ENSCSAG00000005115 Chlorocebus sabaeus ENSCSAG00000005115 I 0.865
ENSXMAG00000006476 Xiphophorus maculatus ENSXMAG00000006476 I 0.865
dbx1a Danio rerio ENSDARG00000086393 I 0.865
dbx1b Takifugu rubripes ENSTRUG00000015886 I 0.865
ENSMPUG00000013914 Mustela putorius furo ENSMPUG00000013914 I 0.865
dbx1b Tetraodon nigroviridis ENSTNIG00000009613 I 0.865
DBX1 Gallus gallus ENSGALG00000003965 I 0.865
ENSPSIG00000012138 Pelodiscus sinensis ENSPSIG00000012138 I 0.865
DBX1 Otolemur garnettii ENSOGAG00000014591 I 0.865
ENSMGAG00000002299 Meleagris gallopavo ENSMGAG00000002299 I 0.865
ENSONIG00000007144 Oreochromis niloticus ENSONIG00000007144 I 0.865
DBX1 Oryctolagus cuniculus ENSOCUG00000007615 I 0.865
ENSOARG00000008379 Ovis aries ENSOARG00000008379 I 0.865
Dbx1 Mus musculus ENSMUSG00000030507 D 0.865
DBX1 Monodelphis domestica ENSMODG00000009081 I 0.865
ENSLOCG00000004886 Lepisosteus oculatus ENSLOCG00000004886 I 0.865
DBX1 Loxodonta africana ENSLAFG00000007378 I 0.865
ENSGMOG00000003244 Gadus morhua ENSGMOG00000003244 I 0.865
ENSPFOG00000014727 Poecilia formosa ENSPFOG00000014727 I 0.865
ENSPMAG00000004878 Petromyzon marinus ENSPMAG00000004878 I 0.865
ENSPFOG00000004028 Poecilia formosa ENSPFOG00000004028 I 0.865
ENSLACG00000011299 Latimeria chalumnae ENSLACG00000011299 I 0.865
dbx1b Oryzias latipes ENSORLG00000000807 I 0.865
DBX1 Oryzias latipes ENSORLG00000014512 I 0.865
ENSXMAG00000010186 Xiphophorus maculatus ENSXMAG00000010186 I 0.865
DBX1 Dasypus novemcinctus ENSDNOG00000015450 I 0.865
Tal_R010631 Tyto alba Tal_R010631 I 0.865
ENSAPLG00000013752 Anas platyrhynchos ENSAPLG00000013752 I 0.865
DBX1 Bos taurus ENSBTAG00000002733 I 0.865
Alligator_sinensis_CCG013033.1 Alligator sinensis Alligator_sinensis_CCG013033.1 I 0.865
fgenesh2_pg.scaffold_222000058 Branchiostoma floridae fgenesh2_pg.scaffold_222000058 I 0.865
Brh_R002799 Buceros rhinoceros Brh_R002799 I 0.865
Pvit_06412 Pogona vitticeps Pvit_06412 I 0.865
ENSAMXG00000012905 Astyanax mexicanus ENSAMXG00000012905 I 0.865
Cmyd_10016425 Chelonia mydas Cmyd_10016425 I 0.865
DBX1 Anolis carolinensis ENSACAG00000015625 I 0.865
ENSAMXG00000016737 Astyanax mexicanus ENSAMXG00000016737 I 0.865
ENSBTAP00000003543-D1 Bos grunniens ENSBTAP00000003543-D1 I 0.865
CGI_10002480 Crassostrea gigas CGI_10002480 I 0.865
dbx1 Xenopus tropicalis XB-GENE-480177 I 0.865
dbx1.S Xenopus laevis XB-GENE-865351 I 0.865
LotgiG64310 Lottia gigantea LotgiG64310 I 0.865
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.865
Afo_R010414 Aptenodytes forsteri Afo_R010414 I 0.865
Aan_R006646 Calypte anna Aan_R006646 I 0.865
CapteG220261 Capitella teleta CapteG220261 I 0.865
Ocbimv22005553m.g Octopus bimaculoides Ocbimv22005553m.g I 0.865
ENSONIG00000012709 Oreochromis niloticus ENSONIG00000012709 I 0.863
DBX1 Cavia porcellus ENSCPOG00000019811 I 0.861
Sakowv30044972m.g Saccoglossus kowalevskii Sakowv30044972m.g I 0.861
BGLB013811 Biomphalaria glabrata BGLB013811 I 0.861
DBX1 Gasterosteus aculeatus ENSGACG00000014112 I 0.861
ENSCING00000012835 Ciona intestinalis ENSCING00000012835 I 0.861
TriadG18102 Trichoplax adhaerens TriadG18102 I 0.855
nRc.2.0.1.g17174 Romanomermis culicivorax nRc.2.0.1.g17174 I 0.843
dbx2.L Xenopus laevis XB-GENE-6486281 I 0.839
ENSSHAG00000012659 Sarcophilus harrisii ENSSHAG00000012659 I 0.831
ENSMEUG00000016510 Macropus eugenii ENSMEUG00000016510 I 0.831
DBX2 Monodelphis domestica ENSMODG00000018530 I 0.831
DBX2 Otolemur garnettii ENSOGAG00000008999 I 0.829
DBX2 Tursiops truncatus ENSTTRG00000003582 I 0.829
ENSTSYG00000001451 Tarsius syrichta ENSTSYG00000001451 I 0.829
ENSOARG00000019598 Ovis aries ENSOARG00000019598 I 0.829
Dbx2 Mus musculus ENSMUSG00000045608 D 0.829
ENSVPAG00000000460 Vicugna pacos ENSVPAG00000000460 I 0.829
ENSNLEG00000017924 Nomascus leucogenys ENSNLEG00000017924 I 0.829
Aan_R012348 Calypte anna Aan_R012348 I 0.829
ENSOCUG00000022068 Oryctolagus cuniculus ENSOCUG00000022068 I 0.829
DBX2 Taeniopygia guttata ENSTGUG00000006020 I 0.829
ENSPPYG00000004431 Pongo abelii ENSPPYG00000004431 I 0.829
Brh_R003637 Buceros rhinoceros Brh_R003637 I 0.829
ENSP00000331470 Macaca fascicularis ENSP00000331470 I 0.829
ENSP00000331470-D1 Bos grunniens ENSP00000331470-D1 I 0.829
DBX2 Pan troglodytes ENSPTRG00000004849 I 0.829
ENSSARG00000007797 Sorex araneus ENSSARG00000007797 I 0.829
Gfo_R004056 Geospiza fortis Gfo_R004056 I 0.829
Myotis_brandtii_DBX2_10029487 Myotis brandtii Myotis_brandtii_DBX2_10029487 I 0.829
DBX2 Tupaia belangeri ENSTBEG00000012639 I 0.829
Dbx2 Rattus norvegicus ENSRNOG00000006885 I 0.829
ENSSTOG00000000232 Ictidomys tridecemlineatus ENSSTOG00000000232 I 0.829
Tal_R005491 Tyto alba Tal_R005491 I 0.829
DBX2 Procavia capensis ENSPCAG00000006299 I 0.829
ENSPANG00000005953 Papio anubis ENSPANG00000005953 I 0.829
Afo_R000355 Aptenodytes forsteri Afo_R000355 I 0.829
ENSPSIG00000009557 Pelodiscus sinensis ENSPSIG00000009557 I 0.829
DBX2 Homo sapiens ENSG00000185610 I 0.829
ENSAPLG00000011161 Anas platyrhynchos ENSAPLG00000011161 I 0.829
DBX2 Loxodonta africana ENSLAFG00000005006 I 0.829
ENSAMEG00000015811 Ailuropoda melanoleuca ENSAMEG00000015811 I 0.829
ENSFALG00000010170 Ficedula albicollis ENSFALG00000010170 I 0.829
DBX2 Bos taurus ENSBTAG00000006635 I 0.829
ENSCAFG00000009372 Canis familiaris ENSCAFG00000009372 I 0.829
DBX2 Callithrix jacchus ENSCJAG00000013213 I 0.829
DBX2 Gorilla gorilla ENSGGOG00000004664 I 0.829
DBX2 Dasypus novemcinctus ENSDNOG00000046429 I 0.829
DBX2 Gallus gallus ENSGALG00000009604 I 0.829
ENSMGAG00000009614 Meleagris gallopavo ENSMGAG00000009614 I 0.829
ENSACAG00000002581 Anolis carolinensis ENSACAG00000002581 I 0.829
ENSMLUG00000007038 Myotis lucifugus ENSMLUG00000007038 I 0.829
DBX2 Equus caballus ENSECAG00000012695 I 0.829
ENSMPUG00000000372 Mustela putorius furo ENSMPUG00000000372 I 0.829
ENSMICG00000007764 Microcebus murinus ENSMICG00000007764 I 0.829
ENSMMUG00000022290 Macaca mulatta ENSMMUG00000022290 I 0.829
ENSCPOG00000011069 Cavia porcellus ENSCPOG00000011069 I 0.829
TC015146 Tribolium castaneum TC015146 I 0.828
GB49362 Apis mellifera GB49362 I 0.828
PHUM365830 Pediculus humanus PHUM365830 I 0.828
NV18099 Nasonia vitripennis NV18099 I 0.828
KGM_12383 Danaus plexippus KGM_12383 I 0.828
ISCW020093 Ixodes scapularis ISCW020093 I 0.828
YQE_05944 Dendroctonus ponderosae YQE_05944 I 0.828
dbx2 Xenopus tropicalis XB-GENE-481734 I 0.827
Pvit_11516 Pogona vitticeps Pvit_11516 I 0.827
ENSLACG00000003968 Latimeria chalumnae ENSLACG00000003968 I 0.826
ACYPI27939 Acyrthosiphon pisum ACYPI27939 I 0.826
CABZ01093502.1 Danio rerio ENSDARG00000105053 I 0.826
DAPPUDRAFT_37379 Daphnia pulex DAPPUDRAFT_37379 I 0.824
ENSLOCG00000016431 Lepisosteus oculatus ENSLOCG00000016431 I 0.824
ENSTNIG00000015979 Tetraodon nigroviridis ENSTNIG00000015979 I 0.822
ENSXMAG00000004689 Xiphophorus maculatus ENSXMAG00000004689 I 0.822
ENSTRUG00000016696 Takifugu rubripes ENSTRUG00000016696 I 0.822
ENSGACG00000004000 Gasterosteus aculeatus ENSGACG00000004000 I 0.822
ENSPFOG00000008292 Poecilia formosa ENSPFOG00000008292 I 0.822
ENSAMXG00000014548 Astyanax mexicanus ENSAMXG00000014548 I 0.822
ENSORLG00000002970 Oryzias latipes ENSORLG00000002970 I 0.822
ENSGMOG00000009056 Gadus morhua ENSGMOG00000009056 I 0.822
ENSONIG00000008764 Oreochromis niloticus ENSONIG00000008764 I 0.822
GA11582 Drosophila pseudoobscura FBgn0071633 I 0.816
GF20095 Drosophila ananassae FBgn0097102 I 0.816
AGAP005727 Anopheles gambiae AGAP005727 I 0.816
ACOM031223 Anopheles coluzzii ACOM031223 I 0.816
MDOA015219 Musca domestica MDOA015219 I 0.816
LLOJ006552 Lutzomyia longipalpis LLOJ006552 I 0.816
AMEM006151 Anopheles merus AMEM006151 I 0.816
AATE018929 Anopheles atroparvus AATE018929 I 0.816
GH16166 Drosophila grimshawi FBgn0123637 I 0.816
GK12528 Drosophila willistoni FBgn0214538 I 0.816
GE21201 Drosophila yakuba FBgn0238476 I 0.816
Dbx Drosophila melanogaster FBgn0261723 D 0.816
GJ12089 Drosophila virilis FBgn0199341 I 0.816
GL25317 Drosophila persimilis FBgn0162901 I 0.816
tetur05g09190 Tetranychus urticae tetur05g09190 I 0.816
GI13319 Drosophila mojavensis FBgn0136076 I 0.816
GG14836 Drosophila erecta FBgn0107091 I 0.816
GM14459 Drosophila sechellia FBgn0169382 I 0.816
AAEL005974 Aedes aegypti AAEL005974 I 0.816
ENSEEUG00000006518 Erinaceus europaeus ENSEEUG00000006518 I 0.813
gw.473.22.1 Branchiostoma floridae gw.473.22.1 I 0.785
NEMVEDRAFT_v1g100892 Nematostella vectensis NEMVEDRAFT_v1g100892 I 0.764
NEMVEDRAFT_v1g80365 Nematostella vectensis NEMVEDRAFT_v1g80365 I 0.764
HelroG148518 Helobdella robusta HelroG148518 I 0.763
LotgiG80492 Lottia gigantea LotgiG80492 I 0.763
DAPPUDRAFT_53297 Daphnia pulex DAPPUDRAFT_53297 I 0.762
gw.83.80.1 Branchiostoma floridae gw.83.80.1 I 0.754
hlx Ciona intestinalis ENSCING00000019191 I 0.750
L798_13412 Zootermopsis nevadensis L798_13412 I 0.733
KGM_21891 Danaus plexippus KGM_21891 I 0.733
SMAR002236 Strigamia maritima SMAR002236 I 0.733
TC008368 Tribolium castaneum TC008368 I 0.733
ENSPMAG00000009840 Petromyzon marinus ENSPMAG00000009840 I 0.733
BGIBMGA008482 Bombyx mori BGIBMGA008482 I 0.733
PHUM604510 Pediculus humanus PHUM604510 I 0.733
ASIS013776 Anopheles sinensis ASIS013776 I 0.733
RPRC010617 Rhodnius prolixus RPRC010617 I 0.733
ADIR004110 Anopheles dirus ADIR004110 I 0.733
AFUN003184 Anopheles funestus AFUN003184 I 0.733
CLEC011407 Cimex lectularius CLEC011407 I 0.733
HHAL002166-PA Halyomorpha halys HHAL002166-PA I 0.733
HLX Bos taurus ENSBTAG00000014560 I 0.732
ENSLACG00000008955 Latimeria chalumnae ENSLACG00000008955 I 0.732
HLX Loxodonta africana ENSLAFG00000001289 I 0.732
hlx1 Oryzias latipes ENSORLG00000012055 I 0.732
HLX Procavia capensis ENSPCAG00000012295 I 0.732
HLX Canis familiaris ENSCAFG00000011340 I 0.732
ENSPANG00000010481 Papio anubis ENSPANG00000010481 I 0.732
HLX Callithrix jacchus ENSCJAG00000006110 I 0.732
HLX Dasypus novemcinctus ENSDNOG00000007014 I 0.732
Ogr19305 Ophisaurus gracilis Ogr19305 I 0.732
HLX Myotis lucifugus ENSMLUG00000015571 I 0.732
hlx Xenopus tropicalis XB-GENE-483226 I 0.732
HLX Oryctolagus cuniculus ENSOCUG00000006015 I 0.732
ENSMICG00000005919 Microcebus murinus ENSMICG00000005919 I 0.732
ENSOARG00000013206 Ovis aries ENSOARG00000013206 I 0.732
HLX Monodelphis domestica ENSMODG00000004664 I 0.732
Hlx Mus musculus ENSMUSG00000039377 D 0.732
ENSNLEG00000013773 Nomascus leucogenys ENSNLEG00000013773 I 0.732
ACEP14997 Atta cephalotes ACEP14997 I 0.732
Sakowv30040055m.g Saccoglossus kowalevskii Sakowv30040055m.g I 0.732
CapteG173964 Capitella teleta CapteG173964 I 0.732
Hsal_11910--XP_001121170.1_APIME Harpegnathos saltator Hsal_11910--XP_001121170.1_APIME I 0.732
ENSAMEG00000010272 Ailuropoda melanoleuca ENSAMEG00000010272 I 0.732
ENSBTAP00000019352-D1 Bos grunniens ENSBTAP00000019352-D1 I 0.732
ENSAMXG00000013419 Astyanax mexicanus ENSAMXG00000013419 I 0.732
ENSLOCG00000016392 Lepisosteus oculatus ENSLOCG00000016392 I 0.732
ENSONIG00000005980 Oreochromis niloticus ENSONIG00000005980 I 0.732
CGI_10013972 Crassostrea gigas CGI_10013972 I 0.732
HLX Otolemur garnettii ENSOGAG00000012065 I 0.732
Pvit_13000 Pogona vitticeps Pvit_13000 I 0.732
Cflo_10458--XP_001121170.1_APIME Camponotus floridanus Cflo_10458--XP_001121170.1_APIME I 0.732
ENSGMOG00000001751 Gadus morhua ENSGMOG00000001751 I 0.732
HLX Pteropus vampyrus ENSPVAG00000004552 I 0.732
HLX Erinaceus europaeus ENSEEUG00000004973 I 0.732
HLX Cavia porcellus ENSCPOG00000024028 I 0.732
ENSSTOG00000006326 Ictidomys tridecemlineatus ENSSTOG00000006326 I 0.732
ENSCSAG00000015879 Chlorocebus sabaeus ENSCSAG00000015879 I 0.732
ENSXMAG00000017389 Xiphophorus maculatus ENSXMAG00000017389 I 0.732
ENSMPUG00000003954 Mustela putorius furo ENSMPUG00000003954 I 0.732
ENSSSCG00000010830 Sus scrofa ENSSSCG00000010830 I 0.732
ENSSHAG00000012054 Sarcophilus harrisii ENSSHAG00000012054 I 0.732
SPU_014802 Strongylocentrotus purpuratus SPU_014802 I 0.732
HLX Homo sapiens ENSG00000136630 I 0.732
Hlx Rattus norvegicus ENSRNOG00000002309 I 0.732
hlx1 Danio rerio ENSDARG00000009134 I 0.732
hlx1 Gasterosteus aculeatus ENSGACG00000010057 I 0.732
ENSPPYG00000000202 Pongo abelii ENSPPYG00000000202 I 0.732
HLX Equus caballus ENSECAG00000003025 I 0.732
Hlx Dipodomys ordii ENSDORG00000001941 I 0.732
hlx1 Tetraodon nigroviridis ENSTNIG00000016400 I 0.732
ENSPFOG00000018919 Poecilia formosa ENSPFOG00000018919 I 0.732
hlx1 Takifugu rubripes ENSTRUG00000006753 I 0.732
HLX Gorilla gorilla ENSGGOG00000002735 I 0.732
SINV11867 Solenopsis invicta SINV11867 I 0.732
HLX Pan troglodytes ENSPTRG00000002004 I 0.732
ENSPSIG00000013519 Pelodiscus sinensis ENSPSIG00000013519 I 0.732
HLX Tupaia belangeri ENSTBEG00000014384 I 0.732
GB42897 Apis mellifera GB42897 I 0.732
MDOA007091 Musca domestica MDOA007091 I 0.731
GF14286 Drosophila ananassae FBgn0091313 I 0.731
LCUP007749 Lucilia cuprina LCUP007749 I 0.731
GG10151 Drosophila erecta FBgn0102462 I 0.731
H2.0 Drosophila melanogaster FBgn0001170 D 0.731
GA11095 Drosophila pseudoobscura FBgn0071150 I 0.731
GI11292 Drosophila mojavensis FBgn0134053 I 0.731
GH10711 Drosophila grimshawi FBgn0118192 I 0.731
GK15402 Drosophila willistoni FBgn0217407 I 0.731
GE18959 Drosophila yakuba FBgn0236329 I 0.731
GD22610 Drosophila simulans FBgn0194011 I 0.731
GJ12503 Drosophila virilis FBgn0199743 I 0.731
GM17974 Drosophila sechellia FBgn0172881 I 0.731
GL19089 Drosophila persimilis FBgn0156689 I 0.731
ACYPI48371 Acyrthosiphon pisum ACYPI48371 I 0.720
HLX Ochotona princeps ENSOPRG00000011504 I 0.716
ENSOANG00000001435 Ornithorhynchus anatinus ENSOANG00000001435 I 0.716
HelroG74087 Helobdella robusta HelroG74087 I 0.713
SMU15032021 Schmidtea mediterranea SMU15032021 I 0.709
SMU15029512 Schmidtea mediterranea SMU15029512 I 0.707
HLX Felis catus ENSFCAG00000002974 I 0.685
AAEL012150 Aedes aegypti AAEL012150 I 0.683
D917_00900 Trichinella nativa D917_00900 I 0.656
EFV57815 Trichinella spiralis EFV57815 I 0.656
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I 0.654
LDEC019190 Leptinotarsa decemlineata LDEC019190 I 0.638
ENSPMAG00000000895 Petromyzon marinus ENSPMAG00000000895 I 0.614
tetur22g00030 Tetranychus urticae tetur22g00030 I 0.613
nanog Danio rerio ENSDARG00000075113 I 0.609
ENSPFOG00000009708 Poecilia formosa ENSPFOG00000009708 I 0.609
ENSACAG00000015317 Anolis carolinensis ENSACAG00000015317 I 0.608
Aan_R009530 Calypte anna Aan_R009530 I 0.599