rps6kal (Tetraodon nigroviridis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTNIG00000015774 T216546_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN

NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.680 0.673
Hdx
M00463_2.00
Mus musculus
HNWYHNN

NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.680 0.664
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000018851 Homeodomain 2 59
ENSTNIP00000018851 Homeodomain 394 453
ENSTNIP00000018852 Homeodomain 2 59
ENSTNIP00000018852 Homeodomain 389 448

Links

Other Homeodomain family TFs
Other Tetraodon nigroviridis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
hdx Takifugu rubripes ENSTRUG00000008150 I 0.859
hdx Gasterosteus aculeatus ENSGACG00000018543 I 0.849
ENSONIG00000017662 Oreochromis niloticus ENSONIG00000017662 I 0.849
ENSPFOG00000004291 Poecilia formosa ENSPFOG00000004291 I 0.832
ENSXMAG00000011901 Xiphophorus maculatus ENSXMAG00000011901 I 0.832
hdx Oryzias latipes ENSORLG00000008466 I 0.826
ENSGMOG00000004501 Gadus morhua ENSGMOG00000004501 I 0.792
ENSLACG00000001553 Latimeria chalumnae ENSLACG00000001553 I 0.706
Hdx Rattus norvegicus ENSRNOG00000037799 I 0.706
ENSLOCG00000015046 Lepisosteus oculatus ENSLOCG00000015046 I 0.699
hdx Danio rerio ENSDARG00000079382 I 0.689
Ogr06876 Ophisaurus gracilis Ogr06876 I 0.682
Pvit_02951 Pogona vitticeps Pvit_02951 I 0.682
HDX Anolis carolinensis ENSACAG00000014116 I 0.682
HDX Sorex araneus ENSSARG00000009351 I 0.680
HDX Pan troglodytes ENSPTRG00000022065 I 0.680
ENSPSIG00000003320 Pelodiscus sinensis ENSPSIG00000003320 I 0.680
ENSPPYG00000020514 Pongo abelii ENSPPYG00000020514 I 0.680
ENSSHAG00000014376 Sarcophilus harrisii ENSSHAG00000014376 I 0.680
HDX Taeniopygia guttata ENSTGUG00000002499 I 0.680
ENSTSYG00000009619 Tarsius syrichta ENSTSYG00000009619 I 0.680
Cmyd_10021519 Chelonia mydas Cmyd_10021519 I 0.680
ENSP00000297977 Macaca fascicularis ENSP00000297977 I 0.680
Gfo_R008526 Geospiza fortis Gfo_R008526 I 0.680
Brh_R002803 Buceros rhinoceros Brh_R002803 I 0.680
Alligator_sinensis_CCG017359.1 Alligator sinensis Alligator_sinensis_CCG017359.1 I 0.680
HDX Vicugna pacos ENSVPAG00000003255 I 0.680
Aan_R004747 Calypte anna Aan_R004747 I 0.680
Afo_R014150 Aptenodytes forsteri Afo_R014150 I 0.680
HDX Tursiops truncatus ENSTTRG00000000100 I 0.680
HDX Oryctolagus cuniculus ENSOCUG00000000903 I 0.680
HDX Erinaceus europaeus ENSEEUG00000011626 I 0.680
HDX Echinops telfairi ENSETEG00000018031 I 0.680
ENSFALG00000004050 Ficedula albicollis ENSFALG00000004050 I 0.680
HDX Felis catus ENSFCAG00000005781 I 0.680
HDX Equus caballus ENSECAG00000024862 I 0.680
ENSCSAG00000010546 Chlorocebus sabaeus ENSCSAG00000010546 I 0.680
ENSAPLG00000007946 Anas platyrhynchos ENSAPLG00000007946 I 0.680
HDX Canis familiaris ENSCAFG00000017380 I 0.680
HDX Callithrix jacchus ENSCJAG00000008295 I 0.680
HDX Cavia porcellus ENSCPOG00000014501 I 0.680
HDX Homo sapiens ENSG00000165259 D 0.680
HDX Gallus gallus ENSGALG00000007041 I 0.680
Hdx Mus musculus ENSMUSG00000034551 D 0.680
ENSNLEG00000002624 Nomascus leucogenys ENSNLEG00000002624 I 0.680
ENSOARG00000001832 Ovis aries ENSOARG00000001832 I 0.680
HDX Otolemur garnettii ENSOGAG00000031446 I 0.680
ENSMPUG00000006315 Mustela putorius furo ENSMPUG00000006315 I 0.680
HDX Monodelphis domestica ENSMODG00000014307 I 0.680
HDX Gorilla gorilla ENSGGOG00000005551 I 0.680
HDX Loxodonta africana ENSLAFG00000028655 I 0.680
HDX Meleagris gallopavo ENSMGAG00000004732 I 0.680
ENSPANG00000014327 Papio anubis ENSPANG00000014327 I 0.680
HDX Macaca mulatta ENSMMUG00000020536 I 0.680
hdx Xenopus tropicalis XB-GENE-853748 I 0.679