CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hdx
(
Takifugu rubripes
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSTRUG00000008150
T216689_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.672
0.655
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.672
0.655
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000020371
Homeodomain
2
59
NLRSVFTAEQQRILERYYENGMTNQSKACFQLILQCAQEAKLDFSVVRTWVGNKRRKL
ENSTRUP00000020371
Homeodomain
401
460
QDRTQFSDGDLIQLKHYWDRGMTSLGSVCREKINAAANQLGVDTEIVRTWISNRRRKFRL
ENSTRUP00000020372
Homeodomain
2
59
NLRSVFTAEQQRILERYYENGMTNQSKACFQLILQCAQEAKLDFSVVRTWVGNKRRKL
ENSTRUP00000020372
Homeodomain
396
455
QDRTQFSDGDLIQLKHYWDRGMTSLGSVCREKINAAANQLGVDTEIVRTWISNRRRKFRL
ENSTRUP00000020373
Homeodomain
2
59
NLRSVFTAEQQRILERYYENGMTNQSKACFQLILQCAQEAKLDFSVVRTWVGNKRRKL
ENSTRUP00000020373
Homeodomain
402
461
QDRTQFSDGDLIQLKHYWDRGMTSLGSVCREKINAAANQLGVDTEIVRTWISNRRRKFRL
Links
Other
Homeodomain
family TFs
Other
Takifugu rubripes
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy