irx6a (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000010131 T216717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ara
M06518_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.808 0.860
caup
M06519_2.00
Drosophila melanogaster
WAACA

TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.808 0.860
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN

NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.808 0.860
ara
M06314_2.00
Drosophila melanogaster
DWWACA

TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.808 0.860
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA

TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.808 0.860
caup
M06316_2.00
Drosophila melanogaster
NDDACA

TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.808 0.860
Irx2
M00386_2.00
Mus musculus
NNDACAHNN

NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.800 0.825
Irx5
M00455_2.00
Mus musculus
NNNDACAHN

NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.800 0.825
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.800 0.825
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.800 0.825
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN

NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.800 0.825
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY

RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.800 0.825
Irx4
M00416_2.00
Mus musculus
NNNDAMAH

DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.789 0.877
Irx6
M00456_2.00
Mus musculus
NNDAHWN

NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.777 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000025510 Homeodomain 152 211

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R005242 Aptenodytes forsteri Afo_R005242 N 0.000
ENSAMEG00000007290 Ailuropoda melanoleuca ENSAMEG00000007290 N 0.000
ENSAPLG00000012750 Anas platyrhynchos ENSAPLG00000012750 N 0.000
ENSBTAP00000001994-D1 Bos grunniens ENSBTAP00000001994-D1 N 0.000
ENSCSAG00000012442 Chlorocebus sabaeus ENSCSAG00000012442 N 0.000
ENSFALG00000005635 Ficedula albicollis ENSFALG00000005635 N 0.000
ENSMPUG00000008759 Mustela putorius furo ENSMPUG00000008759 N 0.000
ENSNLEG00000003582 Nomascus leucogenys ENSNLEG00000003582 N 0.000
ENSOARG00000005313 Ovis aries ENSOARG00000005313 N 0.000
ENSP00000287025 Macaca fascicularis ENSP00000287025 N 0.000
ENSPANG00000000418 Papio anubis ENSPANG00000000418 N 0.000
ENSPPYG00000018764 Pongo abelii ENSPPYG00000018764 N 0.000
ENSSHAG00000005026 Sarcophilus harrisii ENSSHAG00000005026 N 0.000
ENSSTOG00000008021 Ictidomys tridecemlineatus ENSSTOG00000008021 N 0.000
Gfo_R014552 Geospiza fortis Gfo_R014552 N 0.000
MTERF3 Loxodonta africana ENSLAFG00000002544 N 0.000
MTERF3 Procavia capensis ENSPCAG00000009302 N 0.000
MTERF3 Pan troglodytes ENSPTRG00000020441 N 0.000
Mterf3 Rattus norvegicus ENSRNOG00000004492 N 0.000
mterf3 Xenopus tropicalis XB-GENE-6454740 N 0.000
MTERF3 Tupaia belangeri ENSTBEG00000002615 N 0.000
MTERF3 Tursiops truncatus ENSTTRG00000007349 N 0.000
MTERF3 Vicugna pacos ENSVPAG00000004132 N 0.000
MTERF3 Callithrix jacchus ENSCJAG00000020561 N 0.000
MTERF3 Otolemur garnettii ENSOGAG00000004303 N 0.000
MTERF3 Oryctolagus cuniculus ENSOCUG00000004276 N 0.000
MTERF3 Canis familiaris ENSCAFG00000009460 N 0.000
MTERF3 Choloepus hoffmanni ENSCHOG00000007893 N 0.000
MTERF3 Cavia porcellus ENSCPOG00000003487 N 0.000
MTERF3 Dasypus novemcinctus ENSDNOG00000041739 N 0.000
Mterf3 Dipodomys ordii ENSDORG00000010477 N 0.000
MTERF3 Equus caballus ENSECAG00000012943 N 0.000
MTERF3 Echinops telfairi ENSETEG00000011372 N 0.000
MTERF3 Felis catus ENSFCAG00000028511 N 0.000
MTERF3 Homo sapiens ENSG00000156469 N 0.000
MTERF3 Gorilla gorilla ENSGGOG00000011535 N 0.000
MTERF3 Myotis lucifugus ENSMLUG00000007186 N 0.000
MTERF3 Macaca mulatta ENSMMUG00000008808 N 0.000
MTERF3 Monodelphis domestica ENSMODG00000006966 N 0.000
Mterf3 Mus musculus ENSMUSG00000021519 N 0.000
MTERF3 Bos taurus ENSBTAG00000001522 N 0.000
Myotis_brandtii_MTERFD1_10032119 Myotis brandtii Myotis_brandtii_MTERFD1_10032119 N 0.000