irx6a (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000010131 T216717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ara
M06518_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.808 0.860
caup
M06519_2.00
Drosophila melanogaster
WAACA

TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.808 0.860
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN

NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.808 0.860
ara
M06314_2.00
Drosophila melanogaster
DWWACA

TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.808 0.860
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA

TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.808 0.860
caup
M06316_2.00
Drosophila melanogaster
NDDACA

TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.808 0.860
Irx2
M00386_2.00
Mus musculus
NNDACAHNN

NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.800 0.825
Irx5
M00455_2.00
Mus musculus
NNNDACAHN

NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.800 0.825
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.800 0.825
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.800 0.825
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN

NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.800 0.825
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY

RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.800 0.825
Irx4
M00416_2.00
Mus musculus
NNNDAMAH

DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.789 0.877
Irx6
M00456_2.00
Mus musculus
NNDAHWN

NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.777 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000025510 Homeodomain 152 211

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL011056 Aedes aegypti AAEL011056 I 0.000
AALB000480 Anopheles albimanus AALB000480 I 0.000
AARA009394 Anopheles arabiensis AARA009394 I 0.000
AATE004348 Anopheles atroparvus AATE004348 I 0.000
ACHR004924 Anopheles christyi ACHR004924 I 0.000
ACOM024390 Anopheles coluzzii ACOM024390 I 0.000
ACUA019797 Anopheles culicifacies ACUA019797 I 0.000
ADAC006780 Anopheles darlingi ADAC006780 I 0.000
ADIR009436 Anopheles dirus ADIR009436 I 0.000
AEPI003648 Anopheles epiroticus AEPI003648 I 0.000
AFUN000987 Anopheles funestus AFUN000987 I 0.000
AGAP028027 Anopheles gambiae AGAP028027 I 0.000
AMAM003703 Anopheles maculatus AMAM003703 I 0.000
AMEC015268 Anopheles melas AMEC015268 I 0.000
AMEM013195 Anopheles merus AMEM013195 I 0.000
AMIN001613 Anopheles minimus AMIN001613 I 0.000
AQUA007895 Anopheles quadriannulatus AQUA007895 I 0.000
ASTEI04999 Anopheles stephensi ASTEI04999 I 0.000
CPIJ016623 Culex quinquefasciatus CPIJ016623 I 0.000
CpipJ_CPIJ016623 Culex pipiens CpipJ_CPIJ016623 I 0.000
GA10322 Drosophila pseudoobscura FBgn0070380 I 0.000
GD24173 Drosophila simulans FBgn0195528 I 0.000
GE13222 Drosophila yakuba FBgn0230916 I 0.000
GF14690 Drosophila ananassae FBgn0091717 I 0.000
GG21149 Drosophila erecta FBgn0113332 I 0.000
GH10835 Drosophila grimshawi FBgn0118316 I 0.000
GI17350 Drosophila mojavensis FBgn0140094 I 0.000
GJ16129 Drosophila virilis FBgn0203314 I 0.000
GK24825 Drosophila willistoni FBgn0226784 I 0.000
GL18909 Drosophila persimilis FBgn0156510 I 0.000
GM17313 Drosophila sechellia FBgn0172223 I 0.000
PPAI009230 Phlebotomus papatasi PPAI009230 I 0.000
Side Drosophila melanogaster FBgn0032741 D 0.000