ENSTRUG00000015049 (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000015049 T216776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
six3
M02102_2.00
Oryzias latipes
NNDAYMBNNN

NNNVKRTHNN
PBM
Weirauch et al.(2014)
pTH5928
0.867 1.000
SIX6
M00326_2.00
Homo sapiens
NNDATMB

VKATHNN
PBM
Barrera et al.(2016)
SIX6_REF
0.865 0.947
Six6
M00169_2.00
Mus musculus
NNAYMNN

NNKRTNN
PBM
Badis et al.(2009)
Six6_2267
0.865 0.947
Six6
M00412_2.00
Mus musculus
NNNTGATAYCN

NGRTATCANNN
PBM
Berger et al.(2008)
Six6_2267
0.865 0.947
Six3
M00483_2.00
Mus musculus
NNNAYMN

NKRTNNN
PBM
Berger et al.(2008)
Six3_1732
0.865 0.947
SIX3
M05159_2.00
Homo sapiens
NNYGATABBN

NVVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX
0.865 0.947
SIX6
M05357_2.00
Homo sapiens
NNYGATASVB

VBSTATCRNN
SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX
0.865 0.947
SIX3
M10698_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX3_Q6
0.865 0.947
SIX6
M00325_2.00
Homo sapiens
NNNDATMB

VKATHNNN
PBM
Barrera et al.(2016)
SIX6_H141N
0.865 0.947
SIX3
M05160_2.00
Homo sapiens
NNYGATABVB

VBVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX
0.865 0.947
SIX6
M05358_2.00
Homo sapiens
VBVYAYCRNN

NNYGRTRBVB
SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX
0.865 0.947
Optix
M02124_2.00
Drosophila melanogaster
NNNNNDATMN

NKATHNNNNN
PBM
Weirauch et al.(2014)
pTH5437
0.865 0.930
Optix
M03850_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
Optix_1
0.865 0.930
Optix
M06526_2.00
Drosophila melanogaster
TGATA

TATCA
B1H
Mathelier et al.(2014)
MA0199.1
0.865 0.930
Optix
M06327_2.00
Drosophila melanogaster
HHVTGATA

TATCABDD
B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360
0.865 0.930
Optix
M06328_2.00
Drosophila melanogaster
NNNTGATA

TATCANNN
B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360
0.865 0.930
SIX6
M00327_2.00
Homo sapiens
NHDAYMBNN

NNVKRTHDN
PBM
Barrera et al.(2016)
SIX6_T165A
0.859 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000038452 Homeodomain 170 226
ENSTRUP00000038453 Homeodomain 170 226

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_017_00744 Aquilegia coerulea Aquca_017_00744 N 0.000
anac074 Arabidopsis thaliana AT4G28530 N 0.000
BGIOSGA009257 Oryza indica BGIOSGA009257 N 0.000
BGIOSGA016756 Oryza indica BGIOSGA016756 N 0.000
Bo1g017380 Brassica oleracea Bo1g017380 N 0.000
Bo7g113180 Brassica oleracea Bo7g113180 N 0.000
Bo8g054390 Brassica oleracea Bo8g054390 N 0.000
Bostr.7867s0694 Boechera stricta Bostr.7867s0694 N 0.000
Bra010362 Brassica rapa Bra010362 N 0.000
Bra011037 Brassica rapa Bra011037 N 0.000
Bra024194 Brassica rapa Bra024194 N 0.000
BRADI5G15587 Brachypodium distachyon BRADI5G15587 N 0.000
Cagra.1225s0038 Capsella grandiflora Cagra.1225s0038 N 0.000
Carubv10005139m.g Capsella rubella Carubv10005139m.g N 0.000
cassava41082.m1 Manihot esculenta cassava41082.m1 N 0.000
Ca_07743 Cicer arietinum Ca_07743 N 0.000
Ciclev10021312m.g Citrus clementina Ciclev10021312m.g N 0.000
Eucgr.K03256 Eucalyptus grandis Eucgr.K03256 N 0.000
evm.TU.supercontig_165.12 Carica papaya evm.TU.supercontig_165.12 N 0.000
F775_08585 Aegilops tauschii F775_08585 N 0.000
F775_17109 Aegilops tauschii F775_17109 N 0.000
anac074 Arabidopsis lyrata fgenesh2_kg.7__1345__AT4G28530.1 N 0.000
gene08112-v1.0-hybrid Fragaria vesca gene08112-v1.0-hybrid N 0.000
GLYMA03G32116 Glycine max GLYMA03G32116 N 0.000
GLYMA10G04350 Glycine max GLYMA10G04350 N 0.000
GLYMA13G18620 Glycine max GLYMA13G18620 N 0.000
GLYMA19G34881 Glycine max GLYMA19G34881 N 0.000
Gorai.001G178800 Gossypium raimondii Gorai.001G178800 N 0.000
Gorai.001G254300 Gossypium raimondii Gorai.001G254300 N 0.000
Gorai.004G221300 Gossypium raimondii Gorai.004G221300 N 0.000
Gorai.007G147300 Gossypium raimondii Gorai.007G147300 N 0.000
GRMZM2G043813 Zea mays GRMZM2G043813 N 0.000
GRMZM2G062009 Zea mays GRMZM2G062009 N 0.000
GRMZM2G081930 Zea mays GRMZM2G081930 N 0.000
GSMUA_Achr11G00880_001 Musa acuminata GSMUA_Achr11G00880_001 N 0.000
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N 0.000
GSMUA_Achr1G10860_001 Musa acuminata GSMUA_Achr1G10860_001 N 0.000
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N 0.000
GSMUA_Achr5G18670_001 Musa acuminata GSMUA_Achr5G18670_001 N 0.000
GSMUA_Achr8G18980_001 Musa acuminata GSMUA_Achr8G18980_001 N 0.000
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N 0.000
LPERR02G20100 Leersia perrieri LPERR02G20100 N 0.000
Lus10022915.g Linum usitatissimum Lus10022915.g N 0.000
Lus10033905.g Linum usitatissimum Lus10033905.g N 0.000
MDP0000697030 Malus domestica MDP0000697030 N 0.000
mgf009162m Mimulus guttatus mgf009162m N 0.000
mgf018312m Mimulus guttatus mgf018312m N 0.000
MLOC_12466 Hordeum vulgare MLOC_12466 N 0.000
MLOC_5165 Hordeum vulgare MLOC_5165 N 0.000
MTR_1g069805 Medicago truncatula MTR_1g069805 N 0.000
MTR_7g097090 Medicago truncatula MTR_7g097090 N 0.000
OB02G31950 Oryza brachyantha OB02G31950 N 0.000
OB02G43380 Oryza brachyantha OB02G43380 N 0.000
OB04G25790 Oryza brachyantha OB04G25790 N 0.000
OBART02G24560 Oryza barthii OBART02G24560 N 0.000
OBART02G36830 Oryza barthii OBART02G36830 N 0.000
OBART04G18700 Oryza barthii OBART04G18700 N 0.000
OGLUM02G24950 Oryza glumaepatula OGLUM02G24950 N 0.000
OGLUM02G38020 Oryza glumaepatula OGLUM02G38020 I 0.000
OGLUM04G18750 Oryza glumaepatula OGLUM04G18750 N 0.000
OLONG_011232 Oryza longistaminata OLONG_011232 N 0.000
OMERI02G24100 Oryza meridionalis OMERI02G24100 N 0.000
OMERI02G34720 Oryza meridionalis OMERI02G34720 N 0.000
ONIVA02G26880 Oryza nivara ONIVA02G26880 N 0.000
ONIVA02G39640 Oryza nivara ONIVA02G39640 N 0.000
ONIVA04G01950 Oryza nivara ONIVA04G01950 N 0.000
OPUNC02G33860 Oryza punctata OPUNC02G33860 N 0.000
OPUNC04G16450 Oryza punctata OPUNC04G16450 N 0.000
ORGLA02G0320500 Oryza glaberrima ORGLA02G0320500 N 0.000
ORGLA04G0158100 Oryza glaberrima ORGLA04G0158100 N 0.000
ORUFI02G25930 Oryza rufipogon ORUFI02G25930 N 0.000
ORUFI02G38340 Oryza rufipogon ORUFI02G38340 N 0.000
ORUFI04G20200 Oryza rufipogon ORUFI04G20200 N 0.000
OS02G0810900 Oryza sativa OS02G0810900 N 0.000
OS04G0515900 Oryza sativa OS04G0515900 N 0.000
Pavir.Aa01668 Panicum virgatum Pavir.Aa01668 N 0.000
Pavir.Ab02337 Panicum virgatum Pavir.Ab02337 N 0.000
Pavir.Ga01251 Panicum virgatum Pavir.Ga01251 N 0.000
Pavir.Gb00655 Panicum virgatum Pavir.Gb00655 N 0.000
Pavir.Ib03261 Panicum virgatum Pavir.Ib03261 N 0.000
Pavir.J11268 Panicum virgatum Pavir.J11268 N 0.000
PDK_20s1301681g003 Phoenix dactylifera PDK_20s1301681g003 N 0.000
PDK_20s1648061g001 Phoenix dactylifera PDK_20s1648061g001 N 0.000
PGSC0003DMG400010294 Solanum tuberosum PGSC0003DMG400010294 N 0.000
PGSC0003DMG400020147 Solanum tuberosum PGSC0003DMG400020147 N 0.000
PK19051.1 Cannabis sativa PK19051.1 N 0.000
Pm020580 Prunus mume Pm020580 N 0.000
PRUPE_ppa009628mg Prunus persica PRUPE_ppa009628mg N 0.000
SapurV1A.0006s0680 Salix purpurea SapurV1A.0006s0680 N 0.000
SapurV1A.0233s0110 Salix purpurea SapurV1A.0233s0110 N 0.000
Sb04g026440 Sorghum bicolor Sb04g026440 N 0.000
Si010799m.g Setaria italica Si010799m.g N 0.000
Si018001m.g Setaria italica Si018001m.g N 0.000
Si036835m.g Setaria italica Si036835m.g N 0.000
Solyc06g008360.2 Solanum lycopersicum Solyc06g008360.2 N 0.000
Solyc09g025310.2 Solanum lycopersicum Solyc09g025310.2 N 0.000
TCM_003998 Theobroma cacao TCM_003998 N 0.000
Thhalv10025606m.g Eutrema salsugineum Thhalv10025606m.g N 0.000
Traes_2BL_D718E27A9 Triticum aestivum Traes_2BL_D718E27A9 N 0.000
Traes_6AL_B92597EA9 Triticum aestivum Traes_6AL_B92597EA9 N 0.000
Traes_6BL_99F790D57 Triticum aestivum Traes_6BL_99F790D57 N 0.000
Traes_6DL_1ABE78799 Triticum aestivum Traes_6DL_1ABE78799 N 0.000
Traes_6DL_8A1342D56 Triticum aestivum Traes_6DL_8A1342D56 N 0.000
TRIUR3_32754 Triticum urartu TRIUR3_32754 N 0.000
TRIUR3_33179 Triticum urartu TRIUR3_33179 N 0.000