ENSTRUG00000015049 (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000015049 T216776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
six3
M02102_2.00
Oryzias latipes
NNDAYMBNNN

NNNVKRTHNN
PBM
Weirauch et al.(2014)
pTH5928
0.867 1.000
SIX6
M00326_2.00
Homo sapiens
NNDATMB

VKATHNN
PBM
Barrera et al.(2016)
SIX6_REF
0.865 0.947
Six6
M00169_2.00
Mus musculus
NNAYMNN

NNKRTNN
PBM
Badis et al.(2009)
Six6_2267
0.865 0.947
Six6
M00412_2.00
Mus musculus
NNNTGATAYCN

NGRTATCANNN
PBM
Berger et al.(2008)
Six6_2267
0.865 0.947
Six3
M00483_2.00
Mus musculus
NNNAYMN

NKRTNNN
PBM
Berger et al.(2008)
Six3_1732
0.865 0.947
SIX3
M05159_2.00
Homo sapiens
NNYGATABBN

NVVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX
0.865 0.947
SIX6
M05357_2.00
Homo sapiens
NNYGATASVB

VBSTATCRNN
SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX
0.865 0.947
SIX3
M10698_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX3_Q6
0.865 0.947
SIX6
M00325_2.00
Homo sapiens
NNNDATMB

VKATHNNN
PBM
Barrera et al.(2016)
SIX6_H141N
0.865 0.947
SIX3
M05160_2.00
Homo sapiens
NNYGATABVB

VBVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX
0.865 0.947
SIX6
M05358_2.00
Homo sapiens
VBVYAYCRNN

NNYGRTRBVB
SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX
0.865 0.947
Optix
M02124_2.00
Drosophila melanogaster
NNNNNDATMN

NKATHNNNNN
PBM
Weirauch et al.(2014)
pTH5437
0.865 0.930
Optix
M03850_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
Optix_1
0.865 0.930
Optix
M06526_2.00
Drosophila melanogaster
TGATA

TATCA
B1H
Mathelier et al.(2014)
MA0199.1
0.865 0.930
Optix
M06327_2.00
Drosophila melanogaster
HHVTGATA

TATCABDD
B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360
0.865 0.930
Optix
M06328_2.00
Drosophila melanogaster
NNNTGATA

TATCANNN
B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360
0.865 0.930
SIX6
M00327_2.00
Homo sapiens
NHDAYMBNN

NNVKRTHDN
PBM
Barrera et al.(2016)
SIX6_T165A
0.859 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000038452 Homeodomain 170 226
ENSTRUP00000038453 Homeodomain 170 226

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CLUG_00076 Candida lusitaniae CLUG_00076 N 0.000
PGUG_01052 Meyerozyma guilliermondii PGUG_01052 N 0.000
LELG_03419 Lodderomyces elongisporus LELG_03419 N 0.000
GNLVRS01_PISO0H14791g Millerozyma farinosa GNLVRS01_PISO0H14791g N 0.000
GNLVRS01_PISO0G14790g Millerozyma farinosa GNLVRS01_PISO0G14790g N 0.000
DEHA2C14124g Debaryomyces hansenii DEHA2C14124g N 0.000
CTRG_03621 Candida tropicalis CTRG_03621 N 0.000
CORT_0D03010 Candida orthopsilosis CORT_0D03010 N 0.000
CLUG_00076 Clavispora lusitaniae CLUG_00076 N 0.000
CD36_12470 Candida dubliniensis CD36_12470 N 0.000
CaO19.4972 Candida albicans CaO19.4972 N 0.000
CaO19.12437 Candida albicans CaO19.12437 N 0.000
PGUG_01052 Candida guilliermondii PGUG_01052 N 0.000
CPAG_05608 Candida parapsilosis CPAG_05608 N 0.000
SPAPADRAFT_51111 Spathaspora passalidarum SPAPADRAFT_51111 N 0.000