SIX6 (Tursiops truncatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTTRG00000003743 T216929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SIX6
M00326_2.00
Homo sapiens
NNDATMB

VKATHNN
PBM
Barrera et al.(2016)
SIX6_REF
0.867 1.000
Six6
M00169_2.00
Mus musculus
NNAYMNN

NNKRTNN
PBM
Badis et al.(2009)
Six6_2267
0.867 1.000
Six6
M00412_2.00
Mus musculus
NNNTGATAYCN

NGRTATCANNN
PBM
Berger et al.(2008)
Six6_2267
0.867 1.000
SIX6
M05357_2.00
Homo sapiens
NNYGATASVB

VBSTATCRNN
SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX
0.867 1.000
SIX6
M05358_2.00
Homo sapiens
VBVYAYCRNN

NNYGRTRBVB
SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX
0.867 1.000
Six3
M00483_2.00
Mus musculus
NNNAYMN

NKRTNNN
PBM
Berger et al.(2008)
Six3_1732
0.865 0.982
SIX3
M05159_2.00
Homo sapiens
NNYGATABBN

NVVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX
0.865 0.982
SIX3
M10698_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX3_Q6
0.865 0.982
SIX6
M00325_2.00
Homo sapiens
NNNDATMB

VKATHNNN
PBM
Barrera et al.(2016)
SIX6_H141N
0.865 0.982
SIX3
M05160_2.00
Homo sapiens
NNYGATABVB

VBVTATCRNN
SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX
0.865 0.982
six3
M02102_2.00
Oryzias latipes
NNDAYMBNNN

NNNVKRTHNN
PBM
Weirauch et al.(2014)
pTH5928
0.865 0.947
Optix
M02124_2.00
Drosophila melanogaster
NNNNNDATMN

NKATHNNNNN
PBM
Weirauch et al.(2014)
pTH5437
0.865 0.930
Optix
M03850_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
Optix_1
0.865 0.930
Optix
M06526_2.00
Drosophila melanogaster
TGATA

TATCA
B1H
Mathelier et al.(2014)
MA0199.1
0.865 0.930
Optix
M06327_2.00
Drosophila melanogaster
HHVTGATA

TATCABDD
B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360
0.865 0.930
Optix
M06328_2.00
Drosophila melanogaster
NNNTGATA

TATCANNN
B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360
0.865 0.930
SIX6
M00327_2.00
Homo sapiens
NHDAYMBNN

NNVKRTHDN
PBM
Barrera et al.(2016)
SIX6_T165A
0.860 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000003516 Homeodomain 187 243

Links

Other Homeodomain family TFs
Other Tursiops truncatus TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_01072 Aegilops tauschii F775_01072 N 0.000
F775_09609 Aegilops tauschii F775_09609 N 0.000
BRADI5G20397 Brachypodium distachyon BRADI5G20397 N 0.000
LPERR04G19640 Leersia perrieri LPERR04G19640 N 0.000
OBART04G23950 Oryza barthii OBART04G23950 N 0.000
OB04G30880 Oryza brachyantha OB04G30880 N 0.000
ORGLA04G0205200 Oryza glaberrima ORGLA04G0205200 N 0.000
OGLUM04G23900 Oryza glumaepatula OGLUM04G23900 N 0.000
BGIOSGA014424 Oryza indica BGIOSGA014424 N 0.000
OLONG_022261 Oryza longistaminata OLONG_022261 N 0.000
OMERI04G19830 Oryza meridionalis OMERI04G19830 N 0.000
ONIVA04G23100 Oryza nivara ONIVA04G23100 N 0.000
OPUNC04G21480 Oryza punctata OPUNC04G21480 N 0.000
ORUFI04G25690 Oryza rufipogon ORUFI04G25690 N 0.000
EAT1 Oryza sativa OS04G0599300 N 0.000
Pavir.Gb00794 Panicum virgatum Pavir.Gb00794 N 0.000
Pavir.Ab02794 Panicum virgatum Pavir.Ab02794 N 0.000
Pavir.Aa00779 Panicum virgatum Pavir.Aa00779 N 0.000
Pavir.J11079 Panicum virgatum Pavir.J11079 N 0.000
Si019192m.g Setaria italica Si019192m.g N 0.000
Si012378m.g Setaria italica Si012378m.g N 0.000
Traes_6AL_1688E9E0A Triticum aestivum Traes_6AL_1688E9E0A N 0.000
Traes_2DL_9DD224B48 Triticum aestivum Traes_2DL_9DD224B48 N 0.000
Traes_6DL_493269065 Triticum aestivum Traes_6DL_493269065 N 0.000
Traes_2AL_6FC5F1FD0 Triticum aestivum Traes_2AL_6FC5F1FD0 N 0.000
Traes_6BL_600E4507F Triticum aestivum Traes_6BL_600E4507F N 0.000
TRIUR3_08191 Triticum urartu TRIUR3_08191 N 0.000