ENSXMAG00000007554 (Xiphophorus maculatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSXMAG00000007554 T217197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NKX6-2
M05184_2.00
Homo sapiens
DTAATTRN

NYAATTAH
SELEX
Yin et al.(2017)
NKX6-2_eDBD_HT-SELEX
0.867 1.000
NKX6-2
M05186_2.00
Homo sapiens
WTAATKAB

VTMATTAW
SELEX
Yin et al.(2017)
NKX6-2_FL_HT-SELEX
0.867 1.000
NKX6-2
M10711_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX62_Q2
0.867 1.000
NKX6-2
M05185_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
NKX6-2_eDBD_Methyl-HT-SELEX
0.867 1.000
NKX6-2
M05187_2.00
Homo sapiens
WTAATKAB

VTMATTAW
SELEX
Yin et al.(2017)
NKX6-2_FL_Methyl-HT-SELEX
0.867 1.000
Nkx6-1
M00466_2.00
Mus musculus
NDTDATNRN

NYNATHAHN
PBM
Berger et al.(2008)
Nkx6-1_2825
0.858 0.982
NKX6-1
M09151_2.00
Homo sapiens
RAHWRATKDSNWWWTRATD

HATYAWWWNSHMATYWDTY
Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B
0.858 0.982
Nkx6-1
M09200_2.00
Mus musculus
HNWRATKDNHWWWTRATDR

YHATYAWWWDNHMATYWND
Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A
0.858 0.982
Nkx6-1
M09573_2.00
Mus musculus
NDTAATKR

YMATTAHN
Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975
0.858 0.982
NKX6-1
M10718_2.00
Homo sapiens
HWTTTAATKGRWT

AWYCMATTAAAWD
Transfac
Matys et al.(2006)
V$NKX61_01
0.858 0.982
NKX6-1
M10719_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX61_08
0.858 0.982
Nkx6-3
M00522_2.00
Mus musculus
NDYDATNRN

NYNATHRHN
PBM
Berger et al.(2008)
Nkx6-3_3446
0.858 0.947
NKX6-3
M05242_2.00
Homo sapiens
NWTAATGRB

VYCATTAWN
SELEX
Yin et al.(2017)
NKX6-3_eDBD_HT-SELEX
0.858 0.947
NKX6-3
M05243_2.00
Homo sapiens
DWTAATGRB

VYCATTAWH
SELEX
Yin et al.(2017)
NKX6-3_eDBD_Methyl-HT-SELEX
0.858 0.947
HGTX
M03869_2.00
Drosophila melanogaster
DTAATKRN

NYMATTAH
SELEX
Nitta et al.(2015)
HGTX_1
0.846 0.930
HGTX
M03870_2.00
Drosophila melanogaster
DTAATKRN

NYMATTAH
SELEX
Nitta et al.(2015)
HGTX_2
0.846 0.930
HGTX
M06542_2.00
Drosophila melanogaster
DTAATKA

TMATTAH
B1H
Mathelier et al.(2014)
MA0191.1
0.846 0.930
HGTX
M06360_2.00
Drosophila melanogaster
DDTAATKA

TMATTAHH
B1H
Zhu et al.(2011)
Hgtx_Cell_FBgn0040318
0.846 0.930
HGTX
M06361_2.00
Drosophila melanogaster
NWTAATKA

TMATTAWN
B1H
Zhu et al.(2011)
Hgtx_SOLEXA_FBgn0040318
0.846 0.930
CBG20882
M01244_2.00
Caenorhabditis briggsae
NDHDATDRN

NYHATHDHN
PBM
Lambert et al.(2019)
pTH11477
0.819 0.754
Q0N4H9_NEMVE
M02165_2.00
Nematostella vectensis
NNYRWWNNN

NNNWWYRNN
PBM
Weirauch et al.(2014)
pTH6101
0.685 0.579
NEMVEDRAFT_v1g129868
M02146_2.00
Nematostella vectensis
NYRAWNDNN

NNHNWTYRN
PBM
Weirauch et al.(2014)
pTH5749
0.679 0.579
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD

HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.617 0.614
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY

RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.617 0.614
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR

YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.617 0.614
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR

YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.617 0.614
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR

YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.617 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000007577 Homeodomain 154 210

Links

Other Homeodomain family TFs
Other Xiphophorus maculatus TFs

308 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g07054 Acanthocheilonema viteae nAv.1.0.1.g07054 N 0.000
ANCCAN_04914 Ancylostoma caninum ANCCAN_04914 N 0.000
ANCCEY_13862 Ancylostoma ceylanicum ANCCEY_13862 N 0.000
ANCDUO_01695 Ancylostoma duodenale ANCDUO_01695 N 0.000
GB44679 Apis mellifera GB44679 N 0.000
ASU_04577 Ascaris suum ASU_04577 N 0.000
BGLB005972 Biomphalaria glabrata BGLB005972 N 0.000
Bm6042 Brugia malayi Bm6042 N 0.000
BTMF_0000210501 Brugia timori BTMF_0000210501 N 0.000
KGM_11481 Danaus plexippus KGM_11481 N 0.000
nDi.2.2.2.g07220 Dirofilaria immitis nDi.2.2.2.g07220 N 0.000
DME_0000980101 Dracunculus medinensis DME_0000980101 N 0.000
EVEC_0001015201 Enterobius vermicularis EVEC_0001015201 N 0.000
GPLIN_000089000 Globodera pallida GPLIN_000089000 N 0.000
GPUH_0001020201 Gongylonema pulchrum GPUH_0001020201 N 0.000
HCOI00708300 Haemonchus contortus HCOI00708300 N 0.000
HPLM_0001560201 Haemonchus placei HPLM_0001560201 N 0.000
HelroG187398 Helobdella robusta HelroG187398 N 0.000
ISCW003309 Ixodes scapularis ISCW003309 N 0.000
LOAG_18231 Loa loa LOAG_18231 N 0.000
LotgiG180212 Lottia gigantea LotgiG180212 N 0.000
MhA1_Contig309.frz3.gene13 Meloidogyne hapla MhA1_Contig309.frz3.gene13 N 0.000
NV14853 Nasonia vitripennis NV14853 N 0.000
NBR_0001426901 Nippostrongylus brasiliensis NBR_0001426901 N 0.000
OFLC_0001456001 Onchocerca flexuosa OFLC_0001456001 N 0.000
nOo.2.0.1.g01527 Onchocerca ochengi nOo.2.0.1.g01527 N 0.000
WBGene00249034 Onchocerca volvulus WBGene00249034 N 0.000
scaffold26-EXSNAP2012.56 Pristionchus exspectatus scaffold26-EXSNAP2012.56 N 0.000
SMAR013016 Strigamia maritima SMAR013016 N 0.000
SVUK_0000622201 Strongylus vulgaris SVUK_0000622201 N 0.000
SMUV_0000864901 Syphacia muris SMUV_0000864901 N 0.000
TELCIR_06695 Teladorsagia circumcincta TELCIR_06695 N 0.000
TCLT_0000698201 Thelazia callipaeda TCLT_0000698201 N 0.000
TCNE_0001907801 Toxocara canis TCNE_0001907801 N 0.000
TC008832 Tribolium castaneum TC008832 N 0.000
D917_06199 Trichinella nativa D917_06199 N 0.000
EFV54708 Trichinella spiralis EFV54708 N 0.000
WUBG_00082 Wuchereria bancrofti WUBG_00082 N 0.000