F775_09568 (Aegilops tauschii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 F775_09568 T217353_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.864 0.946
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.864 0.946
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.864 0.946
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT

AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.860 0.911
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.860 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT22839 Homeodomain 35 94

Links

Other Homeodomain family TFs
Other Aegilops tauschii TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB3 Arabidopsis thaliana AT1G22640 D 0.000
MYB15 Arabidopsis thaliana AT3G23250 D 0.000
MYB59 Arabidopsis thaliana AT5G59780 D 0.000
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.000
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.000
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.000
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.000
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.000
Si026803m.g Setaria italica Si026803m.g I 0.000
Si023104m.g Setaria italica Si023104m.g I 0.000
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.000
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.000
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.000
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.000
Pavir.J33560 Panicum virgatum Pavir.J33560 I 0.000
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.000
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.000
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.000
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.000
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.000
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.000
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.000
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.000
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.000
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.000
GLYMA12G07110 Glycine max GLYMA12G07110 I 0.000
GLYMA11G15180 Glycine max GLYMA11G15180 I 0.000
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.000
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.000
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.000
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I 0.000
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.000
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.000
cassava13590.valid.m1 Manihot esculenta cassava13590.valid.m1 N 0.000
PK22178.1 Cannabis sativa PK22178.1 N 0.000
Lus10040861.g Linum usitatissimum Lus10040861.g N 0.000
MDP0000581761 Malus domestica MDP0000581761 N 0.000
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.000
SapurV1A.2154s0020 Salix purpurea SapurV1A.2154s0020 N 0.000
SapurV1A.2099s0020 Salix purpurea SapurV1A.2099s0020 N 0.000
fgenesh2_kg.397__1__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.397__1__AT3G24310.1 N 0.000
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.000
Carubv10027237m.g Capsella rubella Carubv10027237m.g N 0.000
GLYMA03G41965 Glycine max GLYMA03G41965 N 0.000
Sb05g027370 Sorghum bicolor Sb05g027370 N 0.000
PGSC0003DMG400030397 Solanum tuberosum PGSC0003DMG400030397 N 0.000
Solyc06g005310.2 Solanum lycopersicum Solyc06g005310.2 N 0.000
Solyc06g075660.2 Solanum lycopersicum Solyc06g075660.2 N 0.000
Traes_1BS_060C24872 Triticum aestivum Traes_1BS_060C24872 N 0.000
Traes_2DL_68851ADC8 Triticum aestivum Traes_2DL_68851ADC8 N 0.000
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.000
TRIUR3_12584 Triticum urartu TRIUR3_12584 N 0.000
Ca_11427 Cicer arietinum Ca_11427 N 0.000
Ca_16710 Cicer arietinum Ca_16710 N 0.000
30072.m000986 Ricinus communis 30072.m000986 N 0.000
cassava29437.valid.m1 Manihot esculenta cassava29437.valid.m1 N 0.000
Traes_6BL_931C25F08 Triticum aestivum Traes_6BL_931C25F08 N 0.000
mgf018170m Mimulus guttatus mgf018170m N 0.000
Aquca_027_00267 Aquilegia coerulea Aquca_027_00267 N 0.000
ORUFI01G08780 Oryza rufipogon ORUFI01G08780 N 0.000
PGSC0003DMG402010883 Solanum tuberosum PGSC0003DMG402010883 N 0.000