bcd (Drosophila virilis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0013104 T217461_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bcd
M03779_2.00
Drosophila melanogaster
NNNTAATCCNN

NNGGATTANNN
SELEX
Nitta et al.(2015)
bcd_1
0.867 1.000
bcd
M05872_2.00
Drosophila melanogaster
HTAATCY

RGATTAD
SMiLE-seq
Isakova et al.(2017)
Bcd
0.867 1.000
bcd
M06480_2.00
Drosophila melanogaster
TAATCC

GGATTA
B1H
Mathelier et al.(2014)
MA0212.1
0.867 1.000
bcd
M06219_2.00
Drosophila melanogaster
BNTAATCC

GGATTANV
B1H
Zhu et al.(2011)
Bcd_Cell_FBgn0000166
0.867 1.000
bcd
M06220_2.00
Drosophila melanogaster
HTAAKCYB

VRGMTTAD
B1H
Zhu et al.(2011)
bcd_FlyReg_FBgn0000166
0.867 1.000
bcd
M06221_2.00
Drosophila melanogaster
YWAAKCY

RGMTTWR
B1H
Zhu et al.(2011)
bcd_NAR_FBgn0000166
0.867 1.000
bcd
M06222_2.00
Drosophila melanogaster
BTAATCY

RGATTAV
B1H
Zhu et al.(2011)
Bcd_SOLEXA_FBgn0000166
0.867 1.000
bcd
M09673_2.00
Drosophila melanogaster
YTAAKCY

RGMTTAR
Misc
Kulakovskiy et al.(2009)
bcd
0.867 1.000
bcd
M10782_2.00
Drosophila melanogaster
HTAATCYS

SRGATTAD
Transfac
Matys et al.(2006)
I$BCD_01
0.867 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0238351 Homeodomain 101 157

Links

Other Homeodomain family TFs
Other Drosophila virilis TFs

Invalid Input OrderBy

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action