CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM17434
(
Drosophila sechellia
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
FBgn0172344
T218050_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dr
M00555_2.00
Drosophila melanogaster
TAATTRNN
NNYAATTA
PBM
Busser et al.(2012a)
Msh
0.554
1.000
Dr
M06482_2.00
Drosophila melanogaster
TAATTGS
SCAATTA
B1H
Mathelier et al.(2014)
MA0188.1
0.554
1.000
Dr
M06229_2.00
Drosophila melanogaster
TAATTGSHB
VDSCAATTA
B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492
0.554
1.000
Dr
M06230_2.00
Drosophila melanogaster
TAATTR
YAATTA
B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492
0.554
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0198911
Homeodomain
1
47
QLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKR
Links
Other
Homeodomain
family TFs
Other
Drosophila sechellia
TFs
600 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy