GK10790 (Drosophila willistoni)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0212801 T218225_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
dve
M02122_2.00
Drosophila melanogaster
NTAATCCV

BGGATTAN
PBM
Weirauch et al.(2014)
pTH6218
0.867 1.000
AGAP006642
M02035_2.00
Anopheles gambiae
NHTAATCY

RGATTADN
PBM
Weirauch et al.(2014)
pTH6201
0.866 0.982
NEMVEDRAFT_v1g113057
M02144_2.00
Nematostella vectensis
NYTAATCCBN

NVGGATTARN
PBM
Weirauch et al.(2014)
pTH6135
0.638 0.333
CRX
M00274_2.00
Homo sapiens
NMTAATCCSN

NSGGATTAKN
PBM
Barrera et al.(2016)
CRX_REF
0.632 0.351
Otx1
M00396_2.00
Mus musculus
NTAAKCYN

NRGMTTAN
PBM
Berger et al.(2008)
Otx1_2325
0.632 0.351
Otx2
M00418_2.00
Mus musculus
NTAAKMBN

NVKMTTAN
PBM
Berger et al.(2008)
Otx2_3441
0.632 0.351
Crx
M00489_2.00
Mus musculus
NWAAKMBN

NVKMTTWN
PBM
Berger et al.(2008)
Crx_3485
0.632 0.351
OTX1
M03116_2.00
Homo sapiens
NNTAAKCGGATTANN

NNTAATCCGMTTANN
SELEX
Jolma et al.(2013)
OTX1_1
0.632 0.351
OTX1
M03117_2.00
Homo sapiens
NTAATCSB

VSGATTAN
SELEX
Jolma et al.(2013)
OTX1_2
0.632 0.351
OTX2
M03197_2.00
Homo sapiens
NHTAAKCGGATTANN

NNTAATCCGMTTADN
SELEX
Jolma et al.(2013)
OTX2_1
0.632 0.351
OTX2
M03198_2.00
Homo sapiens
HTAATCCB

VGGATTAD
SELEX
Jolma et al.(2013)
OTX2_2
0.632 0.351
Otx1
M03249_2.00
Mus musculus
NNTAAKCGGATTANN

NNTAATCCGMTTANN
SELEX
Jolma et al.(2013)
Otx1_1
0.632 0.351
Otx1
M03250_2.00
Mus musculus
NTAATCCN

NGGATTAN
SELEX
Jolma et al.(2013)
Otx1_2
0.632 0.351
CRX
M04949_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
CRX_FL_HT-SELEX
0.632 0.351
OTX1
M05022_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX1_eDBD_HT-SELEX
0.632 0.351
OTX1
M05024_2.00
Homo sapiens
NTAATCCNNN

NNNGGATTAN
SELEX
Yin et al.(2017)
OTX1_FL_HT-SELEX
0.632 0.351
OTX2
M05251_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX2_FL_HT-SELEX
0.632 0.351
Crx
M08139_2.00
Mus musculus
YTAATCCYCYY

RRGRGGATTAR
ChIP-seq
Mathelier et al.(2014)
MA0467.1
0.632 0.351
CRX
M09132_2.00
Homo sapiens
BYTAATCCBHYYN

NRRDVGGATTARV
Misc
Kulakovskiy et al.(2013)
CRX_HUMAN.H11MO.0.B
0.632 0.351
OTX2
M09153_2.00
Homo sapiens
BYTAATCCYYN

NRRGGATTARV
Misc
Kulakovskiy et al.(2013)
OTX2_HUMAN.H11MO.0.A
0.632 0.351
Crx
M09208_2.00
Mus musculus
BYTAATCCBHYYN

NRRDVGGATTARV
Misc
Kulakovskiy et al.(2013)
CRX_MOUSE.H11MO.0.A
0.632 0.351
Otx2
M09183_2.00
Mus musculus
HTAATCCYNYNN

NNRNRGGATTAD
Misc
Kulakovskiy et al.(2013)
OTX2_MOUSE.H11MO.0.A
0.632 0.351
Crx
M09577_2.00
Mus musculus
NYTAATCC

GGATTARN
Misc
Heinz et al.(2010)
Retina-Crx_GSE20012
0.632 0.351
Otx2
M09569_2.00
Mus musculus
NHTAATCCHB

VDGGATTADN
Misc
Heinz et al.(2010)
EpiLC-Otx2_GSE56098
0.632 0.351
CRX
M10647_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CRX_Q4_01
0.632 0.351
CRX
M10648_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CRX_Q4_02
0.632 0.351
OTX1
M10673_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX1_Q5
0.632 0.351
OTX2
M10727_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX2_Q3_01
0.632 0.351
OTX2
M10728_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX2_Q3
0.632 0.351
CRX
M00270_2.00
Homo sapiens
NWDAKNN

NNMTHWN
PBM
Barrera et al.(2016)
CRX_E80A
0.632 0.351
CRX
M00275_2.00
Homo sapiens
NMTAATCCSN

NSGGATTAKN
PBM
Barrera et al.(2016)
CRX_V66I
0.632 0.351
CRX
M04950_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
CRX_FL_Methyl-HT-SELEX
0.632 0.351
OTX1
M05023_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX1_eDBD_Methyl-HT-SELEX
0.632 0.351
OTX1
M05025_2.00
Homo sapiens
HTAATCCNHN

NDNGGATTAD
SELEX
Yin et al.(2017)
OTX1_FL_Methyl-HT-SELEX
0.632 0.351
OTX2
M05252_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX2_FL_Methyl-HT-SELEX
0.632 0.351
oc
M03808_2.00
Drosophila melanogaster
HTAATCCB

VGGATTAD
SELEX
Nitta et al.(2015)
oc_1
0.631 0.333
oc
M06502_2.00
Drosophila melanogaster
TAATCC

GGATTA
B1H
Mathelier et al.(2014)
MA0234.1
0.631 0.333
oc
M06282_2.00
Drosophila melanogaster
WTAATCC

GGATTAW
B1H
Zhu et al.(2011)
Oc_Cell_FBgn0004102
0.631 0.333
oc
M06283_2.00
Drosophila melanogaster
NTAATCCB

VGGATTAN
B1H
Zhu et al.(2011)
Oc_SOLEXA_FBgn0004102
0.631 0.333
oc
M09681_2.00
Drosophila melanogaster
HTAATCCN

NGGATTAD
Misc
Kulakovskiy et al.(2009)
oc
0.631 0.333
CRX
M00273_2.00
Homo sapiens
NNYTAATCCVN

NBGGATTARNN
PBM
Barrera et al.(2016)
CRX_R90W
0.622 0.333
ceh-37
M00674_2.00
Caenorhabditis elegans
HTAATCYN

NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10716
0.617 0.316
Dmbx1
M00441_2.00
Mus musculus
NTAATCYNN

NNRGATTAN
PBM
Berger et al.(2008)
Dmbx1_2277
0.615 0.316
ceh-36
M00673_2.00
Caenorhabditis elegans
NWAATCYN

NRGATTWN
PBM
Narasimhan et al.(2015)
pTH10730
0.615 0.316
DMBX1
M03236_2.00
Homo sapiens
NHTAATCCBN

NVGGATTADN
SELEX
Jolma et al.(2013)
DMBX1_1
0.615 0.316
DMBX1
M05383_2.00
Homo sapiens
NTAATCSN

NSGATTAN
SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX
0.615 0.316
DMBX1
M05384_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX
0.615 0.316
ceh-53
M00679_2.00
Caenorhabditis elegans
HTAATCYN

NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10699
0.615 0.298
HBX4_ECHGR
M02195_2.00
Echinococcus granulosus
NHTAATCYNN

NNRGATTADN
PBM
Weirauch et al.(2014)
pTH6301
0.605 0.316
Gsc
M00411_2.00
Mus musculus
NNTAATYBN

NVRATTANN
PBM
Berger et al.(2008)
Gsc_2327
0.604 0.316
GSC
M03146_2.00
Homo sapiens
NHTAATCCNH

DNGGATTADN
SELEX
Jolma et al.(2013)
GSC_1
0.604 0.316
GSC
M05134_2.00
Homo sapiens
NTAATCCB

VGGATTAN
SELEX
Yin et al.(2017)
GSC_eDBD_HT-SELEX
0.604 0.316
GSC
M05136_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
GSC_FL_HT-SELEX
0.604 0.316
gsc
M09584_2.00
Xenopus tropicalis
NTAATCYN

NRGATTAN
Misc
Heinz et al.(2010)
FrogEmbryos-GSC_DRA000576
0.604 0.316
GSC
M05135_2.00
Homo sapiens
HTAATCCB

VGGATTAD
SELEX
Yin et al.(2017)
GSC_eDBD_Methyl-HT-SELEX
0.604 0.316
GSC
M05137_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
GSC_FL_Methyl-HT-SELEX
0.604 0.316
CRX
M00271_2.00
Homo sapiens
NHDAKNN

NNMTHDN
PBM
Barrera et al.(2016)
CRX_R41Q
0.599 0.333
CRX
M00272_2.00
Homo sapiens
NNHNATNN

NNATNDNN
PBM
Barrera et al.(2016)
CRX_R41W
0.599 0.333
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0239933 Homeodomain 219 286

Links

Other Homeodomain family TFs
Other Drosophila willistoni TFs

Invalid Input OrderBy

659 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action