CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.46568.10566
(
Phytophthora kernoviae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
fgenesh_scip_prom.46568.10566
T218496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.46568.10566
Homeodomain
87
148
KKSRRELPPHTVAILKGWMLSREHVKHPYPTDEDKQMLLKKTGISMKQLTNWFTNARKRIWK
fgenesh_scip_prom.46568.10566
Homeodomain
196
226
RRDYPYPNDAERVQLARETGLDASQVDGWVT
Links
Other
Homeodomain
family TFs
Other
Phytophthora kernoviae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG802780
Hyaloperonospora arabidopsidis
HpaG802780
N
0.830
PITG_05545
Phytophthora infestans
PITG_05545
N
0.812
Physo129873
Phytophthora sojae
Physo129873
N
0.806
F443_06612
Phytophthora parasitica
F443_06612
N
0.806
maker-pag1_scaffold_413-snap-gene-0.14
Pythium aphanidermatum
maker-pag1_scaffold_413-snap-gene-0.14
N
0.675
Phyra73163
Phytophthora ramorum
Phyra73163
N
0.658
PYU1_G005257
Pythium ultimum
PYU1_G005257
N
0.600
maker-piw_contig_200-snap-gene-0.21
Pythium iwayamai
maker-piw_contig_200-snap-gene-0.21
N
0.600