GLOINDRAFT_4254 (Rhizophagus irregularis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLOINDRAFT_4254 T218680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Esx1
M00424_2.00
Mus musculus
NYTAATWR

YWATTARN
PBM
Berger et al.(2008)
Esx1_3124
0.677 0.421
CaO19.4000
M02061_2.00
Candida albicans
NNDWATWRN

NYWATWHNN
PBM
Weirauch et al.(2014)
pTH5822
0.670 0.456
UM04928
M02178_2.00
Ustilago maydis
NNNHMATHHN

NDDATKDNNN
PBM
Weirauch et al.(2014)
pTH5932
0.632 0.579
ceh-54
M02188_2.00
Caenorhabditis elegans
HTAATTRVN

NBYAATTAD
PBM
Weirauch et al.(2014)
pTH5643
0.616 0.368
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA04806 Homeodomain 3 59

Links

Other Homeodomain family TFs
Other Rhizophagus irregularis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMAG_05266 Allomyces macrogynus AMAG_05266 I 0.600
AMAG_17748 Allomyces macrogynus AMAG_17748 I 0.600
M378DRAFT_8263 Amanita muscaria M378DRAFT_8263 I 0.603
H311_02306 Anncaliia algerae H311_02306 I 0.613
H311_01337 Anncaliia algerae H311_01337 I 0.613
ENSACAG00000026013 Anolis carolinensis ENSACAG00000026013 I 0.602
CBN18011 Caenorhabditis brenneri CBN18011 I 0.616
CBG14858 Caenorhabditis briggsae CBG14858 I 0.604
ceh-54 Caenorhabditis elegans WBGene00020485 D 0.616
CJA11788 Caenorhabditis japonica CJA11788 I 0.604
CRE00191 Caenorhabditis remanei CRE00191 I 0.616
CDX4 Callithrix jacchus ENSCJAG00000011367 I 0.602
CaO19.4000 Candida albicans CaO19.4000 D 0.670
CaO19.11483 Candida albicans CaO19.11483 I 0.670
CD36_54680 Candida dubliniensis CD36_54680 I 0.665
G210_1625 Candida maltosa G210_1625 I 0.665
CORT_0B02840 Candida orthopsilosis CORT_0B02840 I 0.672
CPAG_03842 Candida parapsilosis CPAG_03842 I 0.660
CTRG_06116 Candida tropicalis CTRG_06116 I 0.660
ENSCAFG00000023214 Canis familiaris ENSCAFG00000023214 I 0.680
SEBOX Cavia porcellus ENSCPOG00000005498 I 0.680
CTHT_0069620 Chaetomium thermophilum CTHT_0069620 I 0.601
ENSCHOG00000002622 Choloepus hoffmanni ENSCHOG00000002622 I 0.615
CC1G_01962 Coprinopsis cinerea CC1G_01962 I 0.603
CGI_10013213 Crassostrea gigas CGI_10013213 I 0.609
EDEG_02526 Edhazardia aedis EDEG_02526 I 0.665
GLOTRDRAFT_92391 Gloeophyllum trabeum GLOTRDRAFT_92391 I 0.603
GYMLUDRAFT_72414 Gymnopus luxurians GYMLUDRAFT_72414 I 0.604
ENSSTOG00000023781 Ictidomys tridecemlineatus ENSSTOG00000023781 I 0.680
LELG_04000 Lodderomyces elongisporus LELG_04000 I 0.665
ML021120a Mnemiopsis leidyi ML021120a I 0.678
Moror_6758 Moniliophthora roreri Moror_6758 I 0.603
Esx1 Mus musculus ENSMUSG00000023443 D 0.677
NERG_00545 Nematocida sp NERG_00545 I 0.625
PHACADRAFT_182311 Phanerochaete carnosa PHACADRAFT_182311 N 0.604
PIIN_02203 Piriformospora indica PIIN_02203 I 0.606
PLEOSDRAFT_1011447 Pleurotus ostreatus PLEOSDRAFT_1011447 I 0.604
PSEUBRA_SCAF12g01810 Pseudozyma brasiliensis PSEUBRA_SCAF12g01810 I 0.610
PFL1_02807 Pseudozyma flocculosa PFL1_02807 I 0.620
PHSY_003535 Pseudozyma hubeiensis PHSY_003535 I 0.632
SEBOX Pteropus vampyrus ENSPVAG00000002882 I 0.680
Esx1 Rattus norvegicus ENSRNOG00000048011 I 0.673
GLOINDRAFT_59306 Rhizophagus irregularis GLOINDRAFT_59306 I 0.641
RO3G_08755 Rhizopus oryzae RO3G_08755 I 0.606
Sakowv30037698m.g Saccoglossus kowalevskii Sakowv30037698m.g I 0.606
M408DRAFT_258951 Serendipita vermifera M408DRAFT_258951 I 0.608
SPPG_03702 Spizellomyces punctatus SPPG_03702 I 0.614
SPPG_05249 Spizellomyces punctatus SPPG_05249 I 0.621
sr15806 Sporisorium reilianum sr15806 I 0.632
TELCIR_13423 Teladorsagia circumcincta TELCIR_13423 I 0.698
TriadG60748 Trichoplax adhaerens TriadG60748 I 0.604
ENSTBEG00000007985 Tupaia belangeri ENSTBEG00000007985 I 0.680
UHOR_07039 Ustilago hordei UHOR_07039 I 0.620
UM04928 Ustilago maydis UM04928 D 0.632