GLOINDRAFT_4254 (Rhizophagus irregularis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLOINDRAFT_4254 T218680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Esx1
M00424_2.00 		Mus musculus
NYTAATWR
YWATTARN		 PBM
Berger et al.(2008)
Esx1_3124 		0.677 0.421
CaO19.4000
M02061_2.00 		Candida albicans
NNDWATWRN
NYWATWHNN		 PBM
Weirauch et al.(2014)
pTH5822 		0.670 0.456
UM04928
M02178_2.00 		Ustilago maydis
NNNHMATHHN
NDDATKDNNN		 PBM
Weirauch et al.(2014)
pTH5932 		0.632 0.579
ceh-54
M02188_2.00 		Caenorhabditis elegans
HTAATTRVN
NBYAATTAD		 PBM
Weirauch et al.(2014)
pTH5643 		0.616 0.368
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA04806 Homeodomain 3 59

Links

Other Homeodomain family TFs
Other Rhizophagus irregularis TFs

Invalid Input OrderBy

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action