GLYMA07G01940 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA07G01940 T218778_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT

AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.867 1.000
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.867 1.000
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.861 0.911
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.861 0.911
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.861 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA07G01940.1 Homeodomain 16 75

Links

Other Homeodomain family TFs
Other Glycine max TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_049_00159 Aquilegia coerulea Aquca_049_00159 N 0.000
cassava20911.m1 Manihot esculenta cassava20911.m1 N 0.000
Ca_03748 Cicer arietinum Ca_03748 N 0.000
GLYMA03G40611 Glycine max GLYMA03G40611 N 0.000
GLYMA19G43280 Glycine max GLYMA19G43280 N 0.000
GLYMA20G36680 Glycine max GLYMA20G36680 N 0.000
LjT40E15.10.nc Lotus japonicus LjT40E15.10.nc N 0.000
MTR_1g081180 Medicago truncatula MTR_1g081180 N 0.000
orange1.1g007139m.g Citrus sinensis orange1.1g007139m.g N 0.000