GRMZM2G061101 (Zea mays)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GRMZM2G061101 T218976_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HOS66
M02156_2.00
Oryza sativa
NNNNDHNN

NNDHNNNN
PBM
Weirauch et al.(2014)
pTH8332
0.728 0.654
KNAT7
M01064_2.00
Arabidopsis thaliana
TGACRKST

ASMYGTCA
PBM
Sullivan et al.(2014)
pTH9798
0.728 0.633
KNAT4
M01238_2.00
Arabidopsis thaliana
NNGACNNNN

NNNNGTCNN
PBM
Lambert et al.(2019)
pTH9968
0.728 0.612
KNAT3
M02051_2.00
Arabidopsis thaliana
NNNGACVBNN

NNVBGTCNNN
PBM
Weirauch et al.(2014)
pTH7600
0.728 0.612
PK25034.1
M01254_2.00
Cannabis sativa
NNTGACRKBN

NVMYGTCANN
PBM
Lambert et al.(2019)
pTH11259
0.686 0.857
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.651 0.510
MEIS3
M03093_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.642 0.449
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.642 0.449
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.629 0.423
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR

YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.629 0.423
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.608 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G061101_P01 Homeodomain 253 304
GRMZM2G061101_P02 Homeodomain 105 159

Links

Other Homeodomain family TFs
Other Zea mays TFs

1228 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R007092 Calypte anna Aan_R007092 I 0.000
Afo_R001863 Aptenodytes forsteri Afo_R001863 I 0.000
Alligator_sinensis_CCG009162.1 Alligator sinensis Alligator_sinensis_CCG009162.1 I 0.000
Brh_R001555 Buceros rhinoceros Brh_R001555 I 0.000
Cmyd_10002494 Chelonia mydas Cmyd_10002494 I 0.000
ctcf Xenopus tropicalis XB-GENE-862914 I 0.000
ctcf Oryzias latipes ENSORLG00000018357 I 0.000
ctcf Oryzias latipes ENSORLG00000008771 I 0.000
CTCF Ochotona princeps ENSOPRG00000013470 I 0.000
CTCF Otolemur garnettii ENSOGAG00000011901 I 0.000
CTCF Oryctolagus cuniculus ENSOCUG00000008983 I 0.000
Ctcf Mus musculus ENSMUSG00000005698 D 0.000
CTCF Monodelphis domestica ENSMODG00000005757 I 0.000
CTCF Procavia capensis ENSPCAG00000009389 I 0.000
CTCF Pan troglodytes ENSPTRG00000008235 I 0.000
CTCF Pteropus vampyrus ENSPVAG00000016588 I 0.000
Ctcf Rattus norvegicus ENSRNOG00000017674 I 0.000
CTCF Sorex araneus ENSSARG00000006220 I 0.000
ctcf Tetraodon nigroviridis ENSTNIG00000009314 I 0.000
CTCF Tursiops truncatus ENSTTRG00000009184 I 0.000
CTCF Vicugna pacos ENSVPAG00000004409 I 0.000
ctcf Takifugu rubripes ENSTRUG00000017943 I 0.000
CTCF Myotis lucifugus ENSMLUG00000005216 I 0.000
CTCF Microcebus murinus ENSMICG00000012128 I 0.000
CTCF Equus caballus ENSECAG00000015924 I 0.000
CTCF Felis catus ENSFCAG00000003492 I 0.000
ctcf Gasterosteus aculeatus ENSGACG00000002504 I 0.000
CTCF Dasypus novemcinctus ENSDNOG00000038156 I 0.000
ctcf Gasterosteus aculeatus ENSGACG00000015865 I 0.000
ctcf Danio rerio ENSDARG00000056621 I 0.000
CTCF Gorilla gorilla ENSGGOG00000001063 I 0.000
CTCF Cavia porcellus ENSCPOG00000010698 I 0.000
CTCF Callithrix jacchus ENSCJAG00000016139 I 0.000
CTCF Canis familiaris ENSCAFG00000020355 I 0.000
CTCF Gallus gallus ENSGALG00000001817 I 0.000
CTCF Bos taurus ENSBTAG00000013757 I 0.000
CTCF Loxodonta africana ENSLAFG00000007101 I 0.000
CTCF Anolis carolinensis ENSACAG00000001050 I 0.000
CTCF Meleagris gallopavo ENSMGAG00000002200 I 0.000
CTCF Homo sapiens ENSG00000102974 D 0.000
ctcf.L Xenopus laevis XB-GENE-864809 I 0.000
ENSAMEG00000017438 Ailuropoda melanoleuca ENSAMEG00000017438 I 0.000
ENSAPLG00000007458 Anas platyrhynchos ENSAPLG00000007458 I 0.000
ENSBTAP00000018279-D1 Bos grunniens ENSBTAP00000018279-D1 I 0.000
ENSCSAG00000003911 Chlorocebus sabaeus ENSCSAG00000003911 I 0.000
ENSFALG00000007163 Ficedula albicollis ENSFALG00000007163 I 0.000
ENSGMOG00000006386 Gadus morhua ENSGMOG00000006386 I 0.000
ENSLACG00000009833 Latimeria chalumnae ENSLACG00000009833 I 0.000
ENSMPUG00000006401 Mustela putorius furo ENSMPUG00000006401 I 0.000
ENSNLEG00000004747 Nomascus leucogenys ENSNLEG00000004747 I 0.000
ENSONIG00000004097 Oreochromis niloticus ENSONIG00000004097 I 0.000
ENSONIG00000005736 Oreochromis niloticus ENSONIG00000005736 I 0.000
ENSP00000264010 Macaca fascicularis ENSP00000264010 I 0.000
ENSPANG00000015703 Papio anubis ENSPANG00000015703 I 0.000
ENSPFOG00000001478 Poecilia formosa ENSPFOG00000001478 I 0.000
ENSPFOG00000001733 Poecilia formosa ENSPFOG00000001733 I 0.000
ENSPPYG00000007461 Pongo abelii ENSPPYG00000007461 I 0.000
ENSPSIG00000003593 Pelodiscus sinensis ENSPSIG00000003593 I 0.000
ENSSHAG00000003783 Sarcophilus harrisii ENSSHAG00000003783 I 0.000
ENSSTOG00000024951 Ictidomys tridecemlineatus ENSSTOG00000024951 I 0.000
ENSXMAG00000014187 Xiphophorus maculatus ENSXMAG00000014187 I 0.000
Gfo_R016015 Geospiza fortis Gfo_R016015 I 0.000
Myotis_brandtii_Ctcf_10015071 Myotis brandtii Myotis_brandtii_Ctcf_10015071 I 0.000
Pvit_02093 Pogona vitticeps Pvit_02093 I 0.000
Tal_R013354 Tyto alba Tal_R013354 I 0.000