CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr4G02680_001
(
Musa acuminata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GSMUA_Achr4G02680_001
T219141_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P02680_001
Homeodomain
485
543
RPKRGLPEKSVSVLRAWMFQNFTHPYPSDGEKNLLALRSGLTRSQVSNWFINARVRLWK
Links
Other
Homeodomain
family TFs
Other
Musa acuminata
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene02674-v1.0-hybrid
Fragaria vesca
gene02674-v1.0-hybrid
N
0.770
Cla023019
Citrullus lanatus
Cla023019
N
0.770
Cucsa.395170
Cucumis sativus
Cucsa.395170
N
0.770
evm.TU.supercontig_78.15
Carica papaya
evm.TU.supercontig_78.15
N
0.769
OBART11G03800
Oryza barthii
OBART11G03800
I
0.759
GSMUA_Achr4G12180_001
Musa acuminata
GSMUA_Achr4G12180_001
N
0.743
Sb04g008030
Sorghum bicolor
Sb04g008030
I
0.739
GRMZM2G161435
Zea mays
GRMZM2G161435
I
0.739
evm.TU.supercontig_195.45
Carica papaya
evm.TU.supercontig_195.45
N
0.738
LjSGA_061861.1
Lotus japonicus
LjSGA_061861.1
I
0.737
PDK_20s1614221g001
Phoenix dactylifera
PDK_20s1614221g001
I
0.718
OLONG_016371
Oryza longistaminata
OLONG_016371
I
0.718
Ciclev10033544m.g
Citrus clementina
Ciclev10033544m.g
N
0.696
orange1.1g040555m.g
Citrus sinensis
orange1.1g040555m.g
N
0.696
Thhalv10002247m.g
Eutrema salsugineum
Thhalv10002247m.g
N
0.695
PK17736.1
Cannabis sativa
PK17736.1
N
0.694
POPTR_0002s03240
Populus trichocarpa
POPTR_0002s03240
N
0.693
MTR_2g095050
Medicago truncatula
MTR_2g095050
N
0.688
SapurV1A.0006s0130
Salix purpurea
SapurV1A.0006s0130
N
0.685
OB12G13660
Oryza brachyantha
OB12G13660
N
0.639
EVEC_0000876401
Enterobius vermicularis
EVEC_0000876401
N
0.603
Aquca_001_00106
Aquilegia coerulea
Aquca_001_00106
I
0.603