GSMUA_Achr4G14600_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr4G14600_001 T219152_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT6
M02037_2.00 		Arabidopsis thaliana
NNWGACNNNN
NNNNGTCWNN		 PBM
Weirauch et al.(2014)
pTH7296 		0.770 0.772
KNOX3_HORVU
M10790_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$KNOX3_01 		0.767 0.877
GRMZM2G135447
M02139_2.00 		Zea mays
DTGACRKS
SMYGTCAH		 PBM
Weirauch et al.(2014)
pTH6328 		0.723 0.842
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.685 0.684
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.630 0.807
TGIF2LX
M03171_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
TGIF2LX_1 		0.605 0.491
TGIF2LX
M05191_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
TGIF2LX_eDBD_HT-SELEX 		0.605 0.491
TGIF2LX
M05193_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
TGIF2LX_FL_HT-SELEX 		0.605 0.491
TGIF2LX
M05192_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
TGIF2LX_eDBD_Methyl-HT-SELEX 		0.605 0.491
TGIF2LX
M05194_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
TGIF2LX_FL_Methyl-HT-SELEX 		0.605 0.491
TGIF2LY
M05313_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
TGIF2LY_eDBD_HT-SELEX 		0.605 0.474
TGIF2LY
M05314_2.00 		Homo sapiens
YGACABVTGTCR
YGACABVTGTCR		 SELEX
Yin et al.(2017)
TGIF2LY_eDBD_Methyl-HT-SELEX 		0.605 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P14600_001 Homeodomain 261 320

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

308 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action