CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr4G18450_001
(
Musa acuminata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GSMUA_Achr4G18450_001
T219154_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P18450_001
Homeodomain
12
76
FRFTQNEVLEMEACLQEVNNAIPPREIICALADKFSATPERVGKIVVQPKQVWNWFQNRRYAQRA
Links
Other
Homeodomain
family TFs
Other
Musa acuminata
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.002G065900
Gossypium raimondii
Gorai.002G065900
N
0.808
SapurV1A.0083s0320
Salix purpurea
SapurV1A.0083s0320
N
0.808
POPTR_0011s09970
Populus trichocarpa
POPTR_0011s09970
N
0.808
Bra037587
Brassica rapa
Bra037587
N
0.805
Bo1g117640
Brassica oleracea
Bo1g117640
N
0.805
PK03811.1
Cannabis sativa
PK03811.1
N
0.804
mgf014854m
Mimulus guttatus
mgf014854m
N
0.788
30209.m001510
Ricinus communis
30209.m001510
N
0.769
Aquca_052_00043
Aquilegia coerulea
Aquca_052_00043
N
0.756
Pavir.Ba02980
Panicum virgatum
Pavir.Ba02980
N
0.754
Pavir.Bb01334
Panicum virgatum
Pavir.Bb01334
N
0.754
Si030167m.g
Setaria italica
Si030167m.g
N
0.754
Sb02g020940
Sorghum bicolor
Sb02g020940
N
0.749
GRMZM2G126170
Zea mays
GRMZM2G126170
N
0.749
AMTR_s00011p00262800
Amborella trichopoda
AMTR_s00011p00262800
N
0.748
OPUNC06G13910
Oryza punctata
OPUNC06G13910
N
0.735
OLONG_009303
Oryza longistaminata
OLONG_009303
N
0.735
Gorai.013G172000
Gossypium raimondii
Gorai.013G172000
N
0.725
Ciclev10008640m.g
Citrus clementina
Ciclev10008640m.g
N
0.724
orange1.1g016887m.g
Citrus sinensis
orange1.1g016887m.g
N
0.724
SapurV1A.0303s0100
Salix purpurea
SapurV1A.0303s0100
N
0.723
TCM_046875
Theobroma cacao
TCM_046875
N
0.721
VIT_19s0014g01880
Vitis vinifera
VIT_19s0014g01880
N
0.719
PRUPE_ppa007389mg
Prunus persica
PRUPE_ppa007389mg
N
0.719
gene27205-v1.0-hybrid
Fragaria vesca
gene27205-v1.0-hybrid
N
0.718
GLYMA06G35561
Glycine max
GLYMA06G35561
N
0.717
chr3.CM0282.620.nc
Lotus japonicus
chr3.CM0282.620.nc
N
0.717
GLYMA12G18490
Glycine max
GLYMA12G18490
N
0.717
Solyc10g007130.2
Solanum lycopersicum
Solyc10g007130.2
N
0.717
MTR_8g061040
Medicago truncatula
MTR_8g061040
N
0.717
Cucsa.032420
Cucumis sativus
Cucsa.032420
N
0.715
MDP0000315095
Malus domestica
MDP0000315095
N
0.714
Lus10013684.g
Linum usitatissimum
Lus10013684.g
N
0.714
MDP0000268133
Malus domestica
MDP0000268133
N
0.714
Lus10017944.g
Linum usitatissimum
Lus10017944.g
N
0.710
Traes_7DS_197A95728
Triticum aestivum
Traes_7DS_197A95728
N
0.692
TRIUR3_19251
Triticum urartu
TRIUR3_19251
N
0.692
MLOC_61712
Hordeum vulgare
MLOC_61712
N
0.692
BRADI1G42040
Brachypodium distachyon
BRADI1G42040
N
0.691
OLONG_009306
Oryza longistaminata
OLONG_009306
N
0.679
OPUNC06G13990
Oryza punctata
OPUNC06G13990
N
0.679
BGIOSGA021223
Oryza indica
BGIOSGA021223
N
0.679
OBART06G15310
Oryza barthii
OBART06G15310
N
0.679
LPERR06G11990
Leersia perrieri
LPERR06G11990
N
0.679
ORUFI06G16210
Oryza rufipogon
ORUFI06G16210
N
0.679
OMERI06G16500
Oryza meridionalis
OMERI06G16500
N
0.679
OS06G0485100
Oryza sativa
OS06G0485100
N
0.679
Bo5g118650
Brassica oleracea
Bo5g118650
N
0.667
TRIUR3_24308
Triticum urartu
TRIUR3_24308
N
0.656
Cagra.1681s0007
Capsella grandiflora
Cagra.1681s0007
N
0.654
Bostr.19424s0824
Boechera stricta
Bostr.19424s0824
N
0.654
Carubv10014092m.g
Capsella rubella
Carubv10014092m.g
N
0.654
Eucgr.F01181
Eucalyptus grandis
Eucgr.F01181
N
0.648
fgenesh2_kg.3__2039__AT3G18380.2
Arabidopsis lyrata
fgenesh2_kg.3__2039__AT3G18380.2
N
0.642
AT3G18380
Arabidopsis thaliana
AT3G18380
N
0.642
Pm011344
Prunus mume
Pm011344
N
0.636
chr3.CM0282.640.nc
Lotus japonicus
chr3.CM0282.640.nc
N
0.618
GRMZM2G111204
Zea mays
GRMZM2G111204
N
0.610
TRIUR3_34435
Triticum urartu
TRIUR3_34435
N
0.600