CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_Achr8G07310_001
(
Musa acuminata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GSMUA_Achr8G07310_001
T219224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr8P07310_001
Homeodomain
99
141
KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQ
Links
Other
Homeodomain
family TFs
Other
Musa acuminata
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR08G04930
Leersia perrieri
LPERR08G04930
N
0.867
ONIVA08G05020
Oryza nivara
ONIVA08G05020
N
0.867
OBART08G05070
Oryza barthii
OBART08G05070
N
0.867
OGLUM08G05340
Oryza glumaepatula
OGLUM08G05340
N
0.867
OPUNC08G04870
Oryza punctata
OPUNC08G04870
N
0.867
BGIOSGA028102
Oryza indica
BGIOSGA028102
N
0.867
ORUFI08G05670
Oryza rufipogon
ORUFI08G05670
N
0.867
GSMUA_Achr11G21700_001
Musa acuminata
GSMUA_Achr11G21700_001
N
0.780
Bra015119
Brassica rapa
Bra015119
N
0.764
VIT_14s0030g02130
Vitis vinifera
VIT_14s0030g02130
N
0.760
BGIOSGA000782
Oryza indica
BGIOSGA000782
N
0.757
OMERI01G28810
Oryza meridionalis
OMERI01G28810
N
0.757
VIT_13s0067g01580
Vitis vinifera
VIT_13s0067g01580
N
0.753
Solyc09g060160.1
Solanum lycopersicum
Solyc09g060160.1
N
0.727
Pavir.Eb03234
Panicum virgatum
Pavir.Eb03234
N
0.678
GPLIN_000241000
Globodera pallida
GPLIN_000241000
N
0.653
PGSC0003DMG400012999
Solanum tuberosum
PGSC0003DMG400012999
N
0.608
BRADI3G15327
Brachypodium distachyon
BRADI3G15327
I
0.326
OS08G0136100
Oryza sativa
OS08G0136100
I
0.326
ORUFI08G02510
Oryza rufipogon
ORUFI08G02510
I
0.326
BGIOSGA027698
Oryza indica
BGIOSGA027698
I
0.326
ORGLA08G0016400
Oryza glaberrima
ORGLA08G0016400
I
0.326
OMERI08G02310
Oryza meridionalis
OMERI08G02310
I
0.326
OBART08G02270
Oryza barthii
OBART08G02270
I
0.326
OLONG_001685
Oryza longistaminata
OLONG_001685
I
0.326
ONIVA08G02450
Oryza nivara
ONIVA08G02450
I
0.326
OB08G12470
Oryza brachyantha
OB08G12470
I
0.326
GRMZM2G122897
Zea mays
GRMZM2G122897
I
0.326
OPUNC08G02090
Oryza punctata
OPUNC08G02090
I
0.326
OGLUM08G02240
Oryza glumaepatula
OGLUM08G02240
I
0.326