HelroG92823 (Helobdella robusta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 HelroG92823 T219546_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NOTO
M03241_2.00 		Homo sapiens
NNTAATKWRN
NYWMATTANN		 SELEX
Jolma et al.(2013)
NOTO_1 		0.618 0.463
NOTO
M05390_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX 		0.618 0.463
NOTO
M05391_2.00 		Homo sapiens
BTMATKRV
BYMATKAV		 SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX 		0.618 0.463
Noto
M02101_2.00 		Mus musculus
NNHHATDDNN
NNHHATDDNN		 PBM
Weirauch et al.(2014)
pTH6268 		0.617 0.444
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP92823 Homeodomain 1 54

Links

Other Homeodomain family TFs
Other Helobdella robusta TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HelroG148585 Helobdella robusta HelroG148585 I 0.793
HelroG141667 Helobdella robusta HelroG141667 I 0.673
HelroG92635 Helobdella robusta HelroG92635 I 0.673
gw.24.256.1 Branchiostoma floridae gw.24.256.1 I 0.661
e_gw.24.254.1 Branchiostoma floridae e_gw.24.254.1 I 0.661
tetur27g01060 Tetranychus urticae tetur27g01060 I 0.643
NOTO Pan troglodytes ENSPTRG00000033777 I 0.618
ENSPANG00000005615 Papio anubis ENSPANG00000005615 I 0.618
ENSPPYG00000012300 Pongo abelii ENSPPYG00000012300 I 0.618
ENSPVAG00000008357 Pteropus vampyrus ENSPVAG00000008357 I 0.618
NOTO Oryctolagus cuniculus ENSOCUG00000005360 I 0.618
ENSP00000381486 Macaca fascicularis ENSP00000381486 I 0.618
ENSBTAP00000044543-D1 Bos grunniens ENSBTAP00000044543-D1 I 0.618
ENSSTOG00000021867 Ictidomys tridecemlineatus ENSSTOG00000021867 I 0.618
NOTO Sus scrofa ENSSSCG00000008306 I 0.618
NOTO Otolemur garnettii ENSOGAG00000034740 I 0.618
ENSOARG00000011697 Ovis aries ENSOARG00000011697 I 0.618
NOTO Homo sapiens ENSG00000214513 D 0.618
ENSCPOG00000021930 Cavia porcellus ENSCPOG00000021930 I 0.618
NOTO Gorilla gorilla ENSGGOG00000014578 I 0.618
ENSNLEG00000010391 Nomascus leucogenys ENSNLEG00000010391 I 0.618
ENSCSAG00000015364 Chlorocebus sabaeus ENSCSAG00000015364 I 0.618
NOTO Bos taurus ENSBTAG00000024061 I 0.618
NOTO Myotis lucifugus ENSMLUG00000029720 I 0.618
NOTO Callithrix jacchus ENSCJAG00000003959 I 0.617
ENSCAFG00000032317 Canis familiaris ENSCAFG00000032317 I 0.617
Noto Rattus norvegicus ENSRNOG00000037863 I 0.617
ENSAMEG00000015599 Ailuropoda melanoleuca ENSAMEG00000015599 I 0.617
Noto Mus musculus ENSMUSG00000068302 D 0.617
ENSMPUG00000007587 Mustela putorius furo ENSMPUG00000007587 I 0.617
ENSMMUG00000012444 Macaca mulatta ENSMMUG00000012444 I 0.617
NOTO Loxodonta africana ENSLAFG00000025649 I 0.616
NOTO Ochotona princeps ENSOPRG00000018284 I 0.616
Noto Dipodomys ordii ENSDORG00000015133 I 0.616
MESCA007502 Megaselia scalaris MESCA007502 I 0.612
ALUE_0000061101 Ascaris lumbricoides ALUE_0000061101 I 0.608