LotgiG100387 (Lottia gigantea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LotgiG100387 T220071_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ESX1
M00291_2.00
Homo sapiens
NNTRATNRN

NYNATYANN
PBM
Barrera et al.(2016)
ESX1_K193R
0.650 0.509
HESX1
M00309_2.00
Homo sapiens
HTAATTRGN

NCYAATTAD
PBM
Barrera et al.(2016)
HESX1_REF
0.635 0.596
HESX1
M00307_2.00
Homo sapiens
TAATTRNN

NNYAATTA
PBM
Barrera et al.(2016)
HESX1_N125S
0.635 0.596
P79681_ACIBE
M02200_2.00
Acipenser baerii
DTAATTRB

VYAATTAH
PBM
Weirauch et al.(2014)
pTH6156
0.635 0.579
HESX1
M00308_2.00
Homo sapiens
NATAHATRN

NYATDTATN
PBM
Barrera et al.(2016)
HESX1_R160C
0.635 0.579
ENSTNIG00000017092
M02109_2.00
Tetraodon nigroviridis
YYAATCAD

HTGATTRR
PBM
Weirauch et al.(2014)
pTH6064
0.619 0.526
HESX1
M00306_2.00
Homo sapiens
WRATDRNN

NNYHATYW
PBM
Barrera et al.(2016)
HESX1_E149K
0.614 0.579
Q4RRY4_TETNG
M02169_2.00
Tetraodon nigroviridis
NNYAATYAN

NTRATTRNN
PBM
Weirauch et al.(2014)
pTH6326
0.613 0.509
vab-7
M02186_2.00
Caenorhabditis elegans
KTAATTAK

MTAATTAM
PBM
Weirauch et al.(2014)
pTH6104
0.605 0.474
Evx2
M00393_2.00
Mus musculus
NNTAAYNN

NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.605 0.456
Evx1
M00395_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.605 0.456
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.605 0.456
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.605 0.456
EVX1
M04985_2.00
Homo sapiens
VTAATKAB

VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.605 0.456
EVX2
M05295_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.605 0.456
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN

NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.605 0.456
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN

NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.605 0.456
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN

NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.605 0.456
EVX2
M10736_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.605 0.456
EVX1
M04986_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.605 0.456
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB

VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.605 0.456
EVX2
M05296_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.605 0.456
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.605 0.456
SNAPOd2T00006620001
M02231_2.00
Oikopleura dioica
NTAATTRN

NYAATTAN
PBM
Weirauch et al.(2014)
pTH5666
0.604 0.509
ENSCING00000016045
M02078_2.00
Ciona intestinalis
NNYTAATTRGN

NCYAATTARNN
PBM
Weirauch et al.(2014)
pTH6551
0.601 0.509
prd-b
M02077_2.00
Ciona intestinalis
NTRATTRNN

NNYAATYAN
PBM
Weirauch et al.(2014)
pTH6284
0.600 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP100387 Homeodomain 10 66

Links

Other Homeodomain family TFs
Other Lottia gigantea TFs

Invalid Input OrderBy

349 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action