LotgiG122283 (Lottia gigantea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LotgiG122283 T220097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR

YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.823 0.804
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR

YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.823 0.804
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR

YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.823 0.804
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN

NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.815 0.786
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA

TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.815 0.786
TLX2
M05020_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.815 0.786
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB

VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.815 0.786
TLX2
M05021_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.815 0.786
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN

NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.771 0.786
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN

NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.771 0.786
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD

HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.771 0.786
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV

BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.771 0.786
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.697 0.589
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.697 0.589
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN

NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.697 0.589
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG

CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.697 0.589
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.697 0.589
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN

NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.697 0.589
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN

NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.697 0.589
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.697 0.571
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.697 0.571
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN

NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.697 0.571
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR

YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.697 0.571
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.697 0.571
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.697 0.571
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG

CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.697 0.571
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY

RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.697 0.571
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.697 0.571
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.697 0.571
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.697 0.571
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.697 0.571
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN

NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.697 0.571
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN

NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.695 0.625
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.695 0.625
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG

CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.695 0.625
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN

NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.695 0.607
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH

DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.695 0.607
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.695 0.607
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG

CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.695 0.607
Hmx2
M00507_2.00
Mus musculus
NHRANYGNNN

NNNCRNTYDN
PBM
Berger et al.(2008)
Hmx2_3424
0.681 0.554
HMX2
M03234_2.00
Homo sapiens
NNTTAAKTGNN

NNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX2_1
0.681 0.554
HMX2
M05373_2.00
Homo sapiens
GNHRAKYGS

SCRMTYDNC
SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX
0.681 0.554
HMX2
M05375_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX
0.681 0.554
HMX2
M05374_2.00
Homo sapiens
NNTAAKTGN

NCAMTTANN
SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX
0.681 0.554
HMX2
M05376_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX
0.681 0.554
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD

HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.681 0.571
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY

RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.681 0.571
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR

YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.681 0.571
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR

YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.681 0.571
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR

YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.681 0.571
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV

BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.679 0.554
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR

YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.679 0.554
lms
M06536_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.679 0.554
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR

YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.679 0.554
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN

NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.679 0.554
lms
M06349_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.679 0.554
Hmx1
M00524_2.00
Mus musculus
NHDAKYRNNN

NNNYRMTHDN
PBM
Berger et al.(2008)
Hmx1_3423
0.663 0.554
HMX1
M03243_2.00
Homo sapiens
NNTTAAKTGNY

RNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX1_1
0.663 0.554
HMX1
M05392_2.00
Homo sapiens
BNYAAKTGN

NCAMTTRNV
SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX
0.663 0.554
HMX1
M05393_2.00
Homo sapiens
VNYAAKTGB

VCAMTTRNB
SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX
0.663 0.554
HMX3
M03233_2.00
Homo sapiens
NNNTAAKTGNN

NNCAMTTANNN
SELEX
Jolma et al.(2013)
HMX3_1
0.663 0.536
Hmx
M03882_2.00
Drosophila melanogaster
NYRAKYGN

NCRMTYRN
SELEX
Nitta et al.(2015)
Hmx_1
0.663 0.536
Hmx
M06554_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Mathelier et al.(2014)
MA0192.1
0.663 0.536
Hmx
M06386_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448
0.663 0.536
Hmx
M06387_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448
0.663 0.536
HMX3
M10754_2.00
Homo sapiens
CAAGTGCGTG

CACGCACTTG
Transfac
Matys et al.(2006)
V$HMX1_01
0.663 0.536
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.661 0.518
E5
M03814_2.00
Drosophila melanogaster
STAATKNN

NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.657 0.500
E5
M06507_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.657 0.500
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA

TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.657 0.500
E5
M06294_2.00
Drosophila melanogaster
NTAATDR

YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.657 0.500
Hmx3_CONSTRUCT
M00537_2.00
PBM CONSTRUCTS
NHDADYRNN

NNYRHTHDN
PBM
Berger et al.(2008)
Hmx3_3490
0.650 0.518
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB

VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.647 0.518
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN

NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.647 0.518
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN

NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.647 0.518
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN

NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.647 0.518
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV

BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.647 0.518
ems
M06484_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.647 0.518
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR

YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.647 0.518
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM

KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.647 0.518
ems
M06235_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.647 0.518
ems
M09676_2.00
Drosophila melanogaster
WTWATGA

TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.647 0.518
Q70HR3_PLEPI
M02210_2.00
Pleurobrachia pileus
NVVTACTWRD

HYWAGTABBN
PBM
Weirauch et al.(2014)
pTH6529
0.646 0.571
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN

NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.645 0.500
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN

NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.645 0.500
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR

YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.645 0.500
EMX1
M05145_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.645 0.500
EMX1
M05147_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.645 0.500
EMX1
M05146_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.645 0.500
EMX1
M05148_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.645 0.500
Emx2
M00495_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.645 0.482
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN

NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.645 0.482
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR

YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.645 0.482
EMX2
M05281_2.00
Homo sapiens
YTAATKAB

VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.645 0.482
EMX2
M05282_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.645 0.482
VAX2
M00284_2.00
Homo sapiens
NNTAATND

HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.638 0.518
Vax1
M00398_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.638 0.518
Vax2
M00464_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.638 0.518
VAX2
M03119_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.638 0.518
VAX2
M05030_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.638 0.518
Vax1
M10764_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.638 0.518
VAX2
M05031_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.638 0.518
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN

NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.635 0.571
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN

NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.635 0.571
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG

CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.635 0.571
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV

BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.635 0.571
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN

NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.635 0.571
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN

NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.632 0.500
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN

NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.630 0.500
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN

NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.630 0.500
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN

NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.630 0.500
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB

VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.630 0.500
slou
M06494_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.630 0.500
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR

YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.630 0.500
slou
M06263_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.630 0.500
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.630 0.554
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.630 0.554
HOXA4
M10755_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.630 0.554
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.630 0.554
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB

VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.630 0.536
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.630 0.536
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN

NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.630 0.536
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY

RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.630 0.536
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.630 0.536
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV

BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.630 0.536
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB

VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.630 0.536
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.630 0.536
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.630 0.536
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN

NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.630 0.536
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB

VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.630 0.536
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN

NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.630 0.536
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.630 0.536
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB

VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.630 0.536
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.630 0.536
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.630 0.536
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.630 0.536
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.630 0.536
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.630 0.536
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.630 0.536
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG

CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.618 0.518
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK

MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.618 0.518
Lbx2
M00465_2.00
Mus musculus
NHAABNRN

NYNVTTDN
PBM
Berger et al.(2008)
Lbx2_3869
0.605 0.607
LBX2
M03224_2.00
Homo sapiens
TAAYYRSNTYNAB

VTNRANSYRRTTA
SELEX
Jolma et al.(2013)
LBX2_1
0.605 0.607
LBX2
M03225_2.00
Homo sapiens
NNTAATTRVN

NBYAATTANN
SELEX
Jolma et al.(2013)
LBX2_2
0.605 0.607
LBX2
M05321_2.00
Homo sapiens
HTAAYRAG

CTYRTTAD
SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_1
0.605 0.607
LBX2
M05322_2.00
Homo sapiens
NTAATTAAYKRG

CYMRTTAATTAN
SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_2
0.605 0.607
LBX2
M05323_2.00
Homo sapiens
VYTAATTRGB

VCYAATTARB
SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_3
0.605 0.607
LBX2
M05324_2.00
Homo sapiens
HTAAYGAG

CTCRTTAD
SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_1
0.605 0.607
LBX2
M05325_2.00
Homo sapiens
ATAATTAATKAG

CTMATTAATTAT
SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_2
0.605 0.607
LBX2
M05326_2.00
Homo sapiens
NNTAATKRDN

NHYMATTANN
SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_3
0.605 0.607
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP122283 Homeodomain 5 60

Links

Other Homeodomain family TFs
Other Lottia gigantea TFs

2003 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA004628 Oryza indica BGIOSGA004628 N 0.000
BGIOSGA017801 Oryza indica BGIOSGA017801 N 0.000
BGIOSGA020526 Oryza indica BGIOSGA020526 N 0.000
BGIOSGA034759 Oryza indica BGIOSGA034759 N 0.000
BGIOSGA036957 Oryza indica BGIOSGA036957 N 0.000
Bo9g024230 Brassica oleracea Bo9g024230 N 0.000
BRADI1G30140 Brachypodium distachyon BRADI1G30140 N 0.000
BRADI2G21197 Brachypodium distachyon BRADI2G21197 N 0.000
Ciclev10032430m.g Citrus clementina Ciclev10032430m.g N 0.000
F775_08202 Aegilops tauschii F775_08202 N 0.000
F775_17323 Aegilops tauschii F775_17323 N 0.000
F775_17324 Aegilops tauschii F775_17324 N 0.000
F775_29696 Aegilops tauschii F775_29696 N 0.000
GLYMA11G16050 Glycine max GLYMA11G16050 N 0.000
GRMZM2G000171 Zea mays GRMZM2G000171 N 0.000
GRMZM2G033230 Zea mays GRMZM2G033230 N 0.000
GRMZM2G055413 Zea mays GRMZM2G055413 N 0.000
GRMZM2G175870 Zea mays GRMZM2G175870 N 0.000
GSMUA_Achr4G00320_001 Musa acuminata GSMUA_Achr4G00320_001 N 0.000
GSMUA_Achr7G03840_001 Musa acuminata GSMUA_Achr7G03840_001 N 0.000
gw1.34.187.1 Physcomitrella patens gw1.34.187.1 N 0.000
LPERR01G29490 Leersia perrieri LPERR01G29490 N 0.000
LPERR05G17340 Leersia perrieri LPERR05G17340 N 0.000
LPERR06G23100 Leersia perrieri LPERR06G23100 N 0.000
LPERR11G02130 Leersia perrieri LPERR11G02130 N 0.000
LPERR12G02240 Leersia perrieri LPERR12G02240 N 0.000
Lus10014121.g Linum usitatissimum Lus10014121.g N 0.000
Lus10016368.g Linum usitatissimum Lus10016368.g N 0.000
MDP0000190186 Malus domestica MDP0000190186 N 0.000
MDP0000893802 Malus domestica MDP0000893802 N 0.000
MDP0000898701 Malus domestica MDP0000898701 N 0.000
MLOC_13410 Hordeum vulgare MLOC_13410 N 0.000
MLOC_60894 Hordeum vulgare MLOC_60894 N 0.000
OB0044G10110 Oryza brachyantha OB0044G10110 N 0.000
OB01G42980 Oryza brachyantha OB01G42980 N 0.000
OB05G28920 Oryza brachyantha OB05G28920 N 0.000
OB06G35370 Oryza brachyantha OB06G35370 N 0.000
OB12G12480 Oryza brachyantha OB12G12480 N 0.000
OBART01G34150 Oryza barthii OBART01G34150 N 0.000
OBART05G21450 Oryza barthii OBART05G21450 N 0.000
OBART06G27540 Oryza barthii OBART06G27540 N 0.000
OBART11G02390 Oryza barthii OBART11G02390 N 0.000
OBART12G02110 Oryza barthii OBART12G02110 N 0.000
OGLUM01G38420 Oryza glumaepatula OGLUM01G38420 N 0.000
OGLUM05G22660 Oryza glumaepatula OGLUM05G22660 N 0.000
OGLUM06G28970 Oryza glumaepatula OGLUM06G28970 N 0.000
OGLUM11G02090 Oryza glumaepatula OGLUM11G02090 N 0.000
OLONG_011776 Oryza longistaminata OLONG_011776 N 0.000
OLONG_016758 Oryza longistaminata OLONG_016758 N 0.000
OLONG_023558 Oryza longistaminata OLONG_023558 N 0.000
OMERI01G30960 Oryza meridionalis OMERI01G30960 N 0.000
OMERI06G27590 Oryza meridionalis OMERI06G27590 N 0.000
OMERI12G01070 Oryza meridionalis OMERI12G01070 N 0.000
ONIVA01G38950 Oryza nivara ONIVA01G38950 N 0.000
ONIVA05G22130 Oryza nivara ONIVA05G22130 N 0.000
ONIVA06G30110 Oryza nivara ONIVA06G30110 N 0.000
ONIVA11G02620 Oryza nivara ONIVA11G02620 N 0.000
OPUNC01G33180 Oryza punctata OPUNC01G33180 N 0.000
OPUNC05G19110 Oryza punctata OPUNC05G19110 N 0.000
OPUNC06G25210 Oryza punctata OPUNC06G25210 N 0.000
OPUNC12G02170 Oryza punctata OPUNC12G02170 N 0.000
orange1.1g024477m.g Citrus sinensis orange1.1g024477m.g N 0.000
ORGLA01G0280700 Oryza glaberrima ORGLA01G0280700 N 0.000
ORGLA05G0186200 Oryza glaberrima ORGLA05G0186200 N 0.000
ORGLA06G0232500 Oryza glaberrima ORGLA06G0232500 N 0.000
ORUFI01G37470 Oryza rufipogon ORUFI01G37470 N 0.000
ORUFI05G22690 Oryza rufipogon ORUFI05G22690 N 0.000
ORUFI06G29500 Oryza rufipogon ORUFI06G29500 N 0.000
ORUFI12G02510 Oryza rufipogon ORUFI12G02510 N 0.000
OS01G0801901 Oryza sativa OS01G0801901 N 0.000
OS05G0495200 Oryza sativa OS05G0495200 N 0.000
OS06G0716800 Oryza sativa OS06G0716800 N 0.000
OS11G0139500 Oryza sativa OS11G0139500 N 0.000
Pavir.Db00007 Panicum virgatum Pavir.Db00007 N 0.000
Pavir.Ea03172 Panicum virgatum Pavir.Ea03172 N 0.000
Pavir.Eb03174 Panicum virgatum Pavir.Eb03174 N 0.000
Pavir.J00911 Panicum virgatum Pavir.J00911 N 0.000
Pavir.J05283 Panicum virgatum Pavir.J05283 N 0.000
Pavir.J21984 Panicum virgatum Pavir.J21984 N 0.000
Pavir.J25286 Panicum virgatum Pavir.J25286 N 0.000
PDK_20s1365351g001 Phoenix dactylifera PDK_20s1365351g001 N 0.000
PDK_20s1623091g001 Phoenix dactylifera PDK_20s1623091g001 N 0.000
Pm016548 Prunus mume Pm016548 N 0.000
POPTR_0001s05750 Populus trichocarpa POPTR_0001s05750 N 0.000
POPTR_0003s20320 Populus trichocarpa POPTR_0003s20320 N 0.000
PRUPE_ppa019868mg Prunus persica PRUPE_ppa019868mg N 0.000
SapurV1A.0009s0600 Salix purpurea SapurV1A.0009s0600 N 0.000
SapurV1A.0445s0220 Salix purpurea SapurV1A.0445s0220 N 0.000
Sb09g024290 Sorghum bicolor Sb09g024290 N 0.000
Sb10g030250 Sorghum bicolor Sb10g030250 N 0.000
SELMODRAFT_409920 Selaginella moellendorffii SELMODRAFT_409920 N 0.000
SELMODRAFT_414462 Selaginella moellendorffii SELMODRAFT_414462 N 0.000
Si002893m.g Setaria italica Si002893m.g N 0.000
Si007107m.g Setaria italica Si007107m.g N 0.000
Si037105m.g Setaria italica Si037105m.g N 0.000
TCM_042360 Theobroma cacao TCM_042360 N 0.000
Traes_1AL_00A8A2030 Triticum aestivum Traes_1AL_00A8A2030 N 0.000
Traes_5AS_6F02C9967 Triticum aestivum Traes_5AS_6F02C9967 N 0.000
Traes_5BS_FC54F9BEA Triticum aestivum Traes_5BS_FC54F9BEA N 0.000
Traes_5DS_4F7973584 Triticum aestivum Traes_5DS_4F7973584 N 0.000
Traes_7AL_A8CAE984E Triticum aestivum Traes_7AL_A8CAE984E N 0.000
Traes_7AL_C7CF7087B Triticum aestivum Traes_7AL_C7CF7087B N 0.000
Traes_7BL_096916DC5 Triticum aestivum Traes_7BL_096916DC5 N 0.000
Traes_7DL_70D4FDB2A Triticum aestivum Traes_7DL_70D4FDB2A N 0.000
Traes_7DL_7DDA16622 Triticum aestivum Traes_7DL_7DDA16622 N 0.000
TRIUR3_01653 Triticum urartu TRIUR3_01653 N 0.000
TRIUR3_12850 Triticum urartu TRIUR3_12850 N 0.000
TRIUR3_17772 Triticum urartu TRIUR3_17772 N 0.000
TRIUR3_18393 Triticum urartu TRIUR3_18393 N 0.000
TRIUR3_23486 Triticum urartu TRIUR3_23486 N 0.000
ATBZIP24 Vitis vinifera VIT_13s0158g00380 N 0.000