LotgiG80580 (Lottia gigantea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LotgiG80580 T220188_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ESX1
M00291_2.00
Homo sapiens
NNTRATNRN

NYNATYANN
PBM
Barrera et al.(2016)
ESX1_K193R
0.650 0.509
P79681_ACIBE
M02200_2.00
Acipenser baerii
DTAATTRB

VYAATTAH
PBM
Weirauch et al.(2014)
pTH6156
0.635 0.596
HESX1
M00309_2.00
Homo sapiens
HTAATTRGN

NCYAATTAD
PBM
Barrera et al.(2016)
HESX1_REF
0.635 0.561
HESX1
M00307_2.00
Homo sapiens
TAATTRNN

NNYAATTA
PBM
Barrera et al.(2016)
HESX1_N125S
0.635 0.561
HESX1
M00308_2.00
Homo sapiens
NATAHATRN

NYATDTATN
PBM
Barrera et al.(2016)
HESX1_R160C
0.635 0.544
ENSTNIG00000017092
M02109_2.00
Tetraodon nigroviridis
YYAATCAD

HTGATTRR
PBM
Weirauch et al.(2014)
pTH6064
0.619 0.509
HESX1
M00306_2.00
Homo sapiens
WRATDRNN

NNYHATYW
PBM
Barrera et al.(2016)
HESX1_E149K
0.614 0.544
Q4RRY4_TETNG
M02169_2.00
Tetraodon nigroviridis
NNYAATYAN

NTRATTRNN
PBM
Weirauch et al.(2014)
pTH6326
0.614 0.526
vab-7
M02186_2.00
Caenorhabditis elegans
KTAATTAK

MTAATTAM
PBM
Weirauch et al.(2014)
pTH6104
0.605 0.474
Evx2
M00393_2.00
Mus musculus
NNTAAYNN

NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.605 0.456
Evx1
M00395_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.605 0.456
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.605 0.456
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.605 0.456
EVX1
M04985_2.00
Homo sapiens
VTAATKAB

VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.605 0.456
EVX2
M05295_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.605 0.456
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN

NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.605 0.456
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN

NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.605 0.456
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN

NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.605 0.456
EVX2
M10736_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.605 0.456
EVX1
M04986_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.605 0.456
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB

VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.605 0.456
EVX2
M05296_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.605 0.456
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.605 0.456
SNAPOd2T00006620001
M02231_2.00
Oikopleura dioica
NTAATTRN

NYAATTAN
PBM
Weirauch et al.(2014)
pTH5666
0.604 0.491
prd-b
M02077_2.00
Ciona intestinalis
NTRATTRNN

NNYAATYAN
PBM
Weirauch et al.(2014)
pTH6284
0.601 0.439
ENSCING00000016045
M02078_2.00
Ciona intestinalis
NNYTAATTRGN

NCYAATTARNN
PBM
Weirauch et al.(2014)
pTH6551
0.601 0.509
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP80580 Homeodomain 1 57

Links

Other Homeodomain family TFs
Other Lottia gigantea TFs

Invalid Input OrderBy

331 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action