LPERR02G24020 (Leersia perrieri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LPERR02G24020 T220224_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZHD7
M02155_2.00
Oryza sativa
NNWAANNNNN

NNNNNTTWNN
PBM
Weirauch et al.(2014)
pTH6076
0.867 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR02G24020.1 Homeodomain 312 372

Links

Other Homeodomain family TFs
Other Leersia perrieri TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.867
ZHD7 Oryza sativa OS02G0706600 D 0.867
OMERI02G28440 Oryza meridionalis OMERI02G28440 I 0.867
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.867
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.867
MLOC_18998 Hordeum vulgare MLOC_18998 I 0.848
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.843
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.843
Si020227m.g Setaria italica Si020227m.g I 0.835
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.829
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.829
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.726
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.726
29983.m003297 Ricinus communis 29983.m003297 I 0.708
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.708
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.704
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.704
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.673
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.652
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.651
Ca_02034 Cicer arietinum Ca_02034 I 0.642
MDP0000804580 Malus domestica MDP0000804580 I 0.639
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.638
TCM_001660 Theobroma cacao TCM_001660 I 0.638
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.638
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.638
Ca_12172 Cicer arietinum Ca_12172 I 0.630
mgf026503m Mimulus guttatus mgf026503m I 0.629
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.629
mgf024641m Mimulus guttatus mgf024641m I 0.625
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.622