LPERR03G05830 (Leersia perrieri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LPERR03G05830 T220230_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_gwp_gw1.C_70211
M02220_2.00
Physcomitrella patens
HMATNANDNN

NNHNTNATKD
PBM
Weirauch et al.(2014)
pTH8489
0.842 0.768
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.822 0.714
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.822 0.714
HAT5
M06914_2.00
Arabidopsis thaliana
NHAATAATTDW

WHAATTATTDN
Dap-seq
OMalley et al.(2016)
HAT5_col_a
0.813 0.768
HAT5
M06915_2.00
Arabidopsis thaliana
WNYAATAATTRWDN

NHWYAATTATTRNW
Dap-seq
OMalley et al.(2016)
HAT5_colamp_a
0.813 0.768
HAT5
M02683_2.00
Arabidopsis thaliana
SCAATAATTNNV

BNNAATTATTGS
SELEX
Mathelier et al.(2014)
MA0008.2
0.813 0.768
HAT5
M10624_2.00
Arabidopsis thaliana
YSCAATAATTNNVN

NBNNAATTATTGSR
Transfac
Matys et al.(2006)
P$ATHB1_01
0.813 0.768
ATHB-16
M02050_2.00
Arabidopsis thaliana
YAATMATT

AATKATTR
PBM
Weirauch et al.(2014)
pTH7270
0.813 0.750
ATHB-6
M02040_2.00
Arabidopsis thaliana
HATNATTDN

NHAATNATD
PBM
Weirauch et al.(2014)
pTH7670
0.809 0.732
ATHB-6
M06909_2.00
Arabidopsis thaliana
NNNHATKATTR

YAATMATDNNN
Dap-seq
OMalley et al.(2016)
ATHB6_col_a
0.809 0.732
ATHB-6
M06910_2.00
Arabidopsis thaliana
NCAATAATTRN

NYAATTATTGN
Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a
0.809 0.732
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.795 0.768
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.795 0.768
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.795 0.768
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.795 0.768
ATHB-53
M06934_2.00
Arabidopsis thaliana
HMAATAATTRD

HYAATTATTKD
Dap-seq
OMalley et al.(2016)
ATHB53_col_a
0.754 0.625
ATHB-53
M06935_2.00
Arabidopsis thaliana
NNWHCAATWATTDDN

NHHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a
0.754 0.625
ATHB-21
M06907_2.00
Arabidopsis thaliana
NNWHCAATWATTDN

NHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB21_col_a
0.751 0.679
ATHB-21
M06908_2.00
Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN

NNAHCAATWATTDNNNHHWW
Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a
0.751 0.679
HB-5
M06924_2.00
Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH

DWWDNNNHMAATWATTGDTNN
Dap-seq
OMalley et al.(2016)
ATHB40_col_a
0.749 0.625
HB-5
M06925_2.00
Arabidopsis thaliana
HHAATWATTGDWNN

NNWHCAATWATTDD
Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a
0.749 0.625
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.684 0.714
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.684 0.714
ATHB-20
M06912_2.00
Arabidopsis thaliana
HYAATAATTRD

HYAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_col_a
0.664 0.696
ATHB-20
M06913_2.00
Arabidopsis thaliana
HYAATMATTRD

HYAATKATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a
0.664 0.696
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR03G05830.1 Homeodomain 55 110

Links

Other Homeodomain family TFs
Other Leersia perrieri TFs

802 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRDM4 Homo sapiens ENSG00000110851 D 0.000
ENSSTOG00000016168 Ictidomys tridecemlineatus ENSSTOG00000016168 I 0.000
PRDM4 Sus scrofa ENSSSCG00000000160 I 0.000
Prdm4 Rattus norvegicus ENSRNOG00000004962 I 0.000
PRDM4 Pan troglodytes ENSPTRG00000005400 I 0.000
ENSPSIG00000012066 Pelodiscus sinensis ENSPSIG00000012066 I 0.000
ENSPPYG00000004913 Pongo abelii ENSPPYG00000004913 I 0.000
PRDM4 Procavia capensis ENSPCAG00000009987 I 0.000
ENSPANG00000022084 Papio anubis ENSPANG00000022084 I 0.000
PRDM4 Ochotona princeps ENSOPRG00000010192 I 0.000
PRDM4 Otolemur garnettii ENSOGAG00000011945 I 0.000
ENSOARG00000017955 Ovis aries ENSOARG00000017955 I 0.000
Pvit_09756 Pogona vitticeps Pvit_09756 I 0.000
ENSTGUG00000010962 Taeniopygia guttata ENSTGUG00000010962 I 0.000
ENSTGUG00000015149 Taeniopygia guttata ENSTGUG00000015149 I 0.000
Myotis_brandtii_PRDM4_10020406 Myotis brandtii Myotis_brandtii_PRDM4_10020406 I 0.000
Gfo_R004636 Geospiza fortis Gfo_R004636 I 0.000
ENSP00000228437 Macaca fascicularis ENSP00000228437 I 0.000
ENSP00000228437-D1 Bos grunniens ENSP00000228437-D1 I 0.000
Cmyd_10007196 Chelonia mydas Cmyd_10007196 I 0.000
Brh_R007685 Buceros rhinoceros Brh_R007685 I 0.000
Alligator_sinensis_CCG012513.1 Alligator sinensis Alligator_sinensis_CCG012513.1 I 0.000
Afo_R011067 Aptenodytes forsteri Afo_R011067 I 0.000
Aan_R008654 Calypte anna Aan_R008654 I 0.000
PRDM4 Vicugna pacos ENSVPAG00000002215 I 0.000
PRDM4 Tursiops truncatus ENSTTRG00000011056 I 0.000
PRDM4 Ornithorhynchus anatinus ENSOANG00000005526 I 0.000
ENSNLEG00000006748 Nomascus leucogenys ENSNLEG00000006748 I 0.000
PRDM4 Erinaceus europaeus ENSEEUG00000006569 I 0.000
PRDM4 Equus caballus ENSECAG00000015423 I 0.000
PRDM4 Dasypus novemcinctus ENSDNOG00000032478 I 0.000
ENSCSAG00000002896 Chlorocebus sabaeus ENSCSAG00000002896 I 0.000
ENSCPOG00000022385 Cavia porcellus ENSCPOG00000022385 I 0.000
PRDM4 Callithrix jacchus ENSCJAG00000015261 I 0.000
PRDM4 Choloepus hoffmanni ENSCHOG00000001744 I 0.000
PRDM4 Canis familiaris ENSCAFG00000001788 I 0.000
PRDM4 Bos taurus ENSBTAG00000012999 I 0.000
ENSAPLG00000009846 Anas platyrhynchos ENSAPLG00000009846 I 0.000
ENSAMEG00000016174 Ailuropoda melanoleuca ENSAMEG00000016174 I 0.000
ENSFALG00000013342 Ficedula albicollis ENSFALG00000013342 I 0.000
PRDM4 Felis catus ENSFCAG00000022478 I 0.000
Prdm4 Mus musculus ENSMUSG00000035529 I 0.000
ENSMPUG00000012238 Mustela putorius furo ENSMPUG00000012238 I 0.000
PRDM4 Monodelphis domestica ENSMODG00000001448 I 0.000
PRDM4 Macaca mulatta ENSMMUG00000015550 I 0.000
PRDM4 Myotis lucifugus ENSMLUG00000000767 I 0.000
PRDM4 Microcebus murinus ENSMICG00000007807 I 0.000
PRDM4 Meleagris gallopavo ENSMGAG00000012815 I 0.000
ENSMEUG00000004495 Macropus eugenii ENSMEUG00000004495 I 0.000
PRDM4 Loxodonta africana ENSLAFG00000001483 I 0.000
PRDM4 Gorilla gorilla ENSGGOG00000001244 I 0.000
PRDM4 Gallus gallus ENSGALG00000012619 I 0.000
PRDM4 Anolis carolinensis ENSACAG00000014907 I 0.000