LPERR06G02270 (Leersia perrieri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LPERR06G02270 T220255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT

AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.796 0.737
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN

NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.788 0.789
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN

NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.788 0.789
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV

BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.788 0.754
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN

NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.746 0.772
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW

WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.746 0.772
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN

NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.746 0.772
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN

NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.744 0.754
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD

HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.744 0.754
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN

NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.732 0.667
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV

BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.732 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR06G02270.1 Homeodomain 78 134

Links

Other Homeodomain family TFs
Other Leersia perrieri TFs

693 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30138.m004021 Ricinus communis 30138.m004021 I 0.000
30174.m008814 Ricinus communis 30174.m008814 I 0.000
AMTR_s00106p00127480 Amborella trichopoda AMTR_s00106p00127480 I 0.000
AMTR_s00129p00124210 Amborella trichopoda AMTR_s00129p00124210 I 0.000
Aquca_020_00579 Aquilegia coerulea Aquca_020_00579 I 0.000
Aquca_035_00175 Aquilegia coerulea Aquca_035_00175 I 0.000
UNE10 Arabidopsis thaliana AT4G00050 D 0.000
BGIOSGA031426 Oryza indica BGIOSGA031426 I 0.000
Bo3g042120 Brassica oleracea Bo3g042120 I 0.000
Bo3g054850 Brassica oleracea Bo3g054850 I 0.000
Bostr.14547s0014 Boechera stricta Bostr.14547s0014 I 0.000
Bra000560 Brassica rapa Bra000560 I 0.000
Bra037312 Brassica rapa Bra037312 I 0.000
BRADI3G33170 Brachypodium distachyon BRADI3G33170 I 0.000
BRADI3G46200 Brachypodium distachyon BRADI3G46200 I 0.000
Cagra.20893s0010 Capsella grandiflora Cagra.20893s0010 I 0.000
Carubv10001567m.g Capsella rubella Carubv10001567m.g I 0.000
Carubv10023299m.g Capsella rubella Carubv10023299m.g N 0.000
cassava13956.valid.m1 Manihot esculenta cassava13956.valid.m1 I 0.000
cassava19894.m1 Manihot esculenta cassava19894.m1 I 0.000
cassava46185.m1 Manihot esculenta cassava46185.m1 I 0.000
Ca_22883 Cicer arietinum Ca_22883 I 0.000
Ciclev10008008m.g Citrus clementina Ciclev10008008m.g I 0.000
Ciclev10019786m.g Citrus clementina Ciclev10019786m.g I 0.000
Ciclev10020053m.g Citrus clementina Ciclev10020053m.g I 0.000
Eucgr.D02499 Eucalyptus grandis Eucgr.D02499 I 0.000
Eucgr.K02496 Eucalyptus grandis Eucgr.K02496 I 0.000
evm.TU.supercontig_1213.3 Carica papaya evm.TU.supercontig_1213.3 I 0.000
evm.TU.supercontig_212.3 Carica papaya evm.TU.supercontig_212.3 I 0.000
evm.TU.supercontig_82.59 Carica papaya evm.TU.supercontig_82.59 I 0.000
gene25546-v1.0-hybrid Fragaria vesca gene25546-v1.0-hybrid I 0.000
gene26073-v1.0-hybrid Fragaria vesca gene26073-v1.0-hybrid I 0.000
GLYMA01G15930 Glycine max GLYMA01G15930 I 0.000
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.000
GLYMA03G04000 Glycine max GLYMA03G04000 I 0.000
GLYMA06G21495 Glycine max GLYMA06G21495 I 0.000
GLYMA11G17120 Glycine max GLYMA11G17120 I 0.000
Gorai.001G078500 Gossypium raimondii Gorai.001G078500 I 0.000
Gorai.001G148300 Gossypium raimondii Gorai.001G148300 I 0.000
Gorai.007G088300 Gossypium raimondii Gorai.007G088300 I 0.000
Gorai.007G118100 Gossypium raimondii Gorai.007G118100 I 0.000
Gorai.008G106900 Gossypium raimondii Gorai.008G106900 I 0.000
Gorai.009G038500 Gossypium raimondii Gorai.009G038500 I 0.000
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.000
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I 0.000
GSMUA_Achr8G11070_001 Musa acuminata GSMUA_Achr8G11070_001 I 0.000
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I 0.000
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.000
Lus10028175.g Linum usitatissimum Lus10028175.g I 0.000
MDP0000288670 Malus domestica MDP0000288670 I 0.000
MDP0000439540 Malus domestica MDP0000439540 I 0.000
mgf005431m Mimulus guttatus mgf005431m I 0.000
OB10G25310 Oryza brachyantha OB10G25310 I 0.000
OBART10G18190 Oryza barthii OBART10G18190 I 0.000
OPUNC10G16560 Oryza punctata OPUNC10G16560 I 0.000
orange1.1g010045m.g Citrus sinensis orange1.1g010045m.g I 0.000
orange1.1g012387m.g Citrus sinensis orange1.1g012387m.g I 0.000
orange1.1g038097m.g Citrus sinensis orange1.1g038097m.g I 0.000
ORGLA10G0133200 Oryza glaberrima ORGLA10G0133200 I 0.000
OS10G0556200 Oryza sativa OS10G0556200 I 0.000
Pavir.Ia02188 Panicum virgatum Pavir.Ia02188 I 0.000
Pavir.J18019 Panicum virgatum Pavir.J18019 I 0.000
PGSC0003DMG400024554 Solanum tuberosum PGSC0003DMG400024554 I 0.000
PGSC0003DMG400025976 Solanum tuberosum PGSC0003DMG400025976 I 0.000
PK15531.1 Cannabis sativa PK15531.1 I 0.000
PK20816.1 Cannabis sativa PK20816.1 I 0.000
Pm024836 Prunus mume Pm024836 I 0.000
POPTR_0002s14430 Populus trichocarpa POPTR_0002s14430 I 0.000
POPTR_0014s06190 Populus trichocarpa POPTR_0014s06190 I 0.000
PRUPE_ppa005629mg Prunus persica PRUPE_ppa005629mg I 0.000
PRUPE_ppa022963mg Prunus persica PRUPE_ppa022963mg I 0.000
SapurV1A.0033s0400 Salix purpurea SapurV1A.0033s0400 I 0.000
SapurV1A.0248s0190 Salix purpurea SapurV1A.0248s0190 I 0.000
SapurV1A.0321s0050 Salix purpurea SapurV1A.0321s0050 I 0.000
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.000
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.000
UNE10 Arabidopsis lyrata scaffold_604304.1 I 0.000
SELMODRAFT_425336 Selaginella moellendorffii SELMODRAFT_425336 I 0.000
Si000845m.g Setaria italica Si000845m.g I 0.000
Si012401m.g Setaria italica Si012401m.g I 0.000
Si035334m.g Setaria italica Si035334m.g I 0.000
Solyc01g090790.2 Solanum lycopersicum Solyc01g090790.2 I 0.000
Solyc03g115540.1 Solanum lycopersicum Solyc03g115540.1 I 0.000
Solyc10g018510.1 Solanum lycopersicum Solyc10g018510.1 I 0.000
TCM_004959 Theobroma cacao TCM_004959 I 0.000
TCM_005607 Theobroma cacao TCM_005607 I 0.000
TCM_014141 Theobroma cacao TCM_014141 I 0.000
TCM_037455 Theobroma cacao TCM_037455 I 0.000
Thhalv10028687m.g Eutrema salsugineum Thhalv10028687m.g I 0.000
Traes_1AL_914726769 Triticum aestivum Traes_1AL_914726769 I 0.000
VIT_11s0016g00380 Vitis vinifera VIT_11s0016g00380 I 0.000
UNE10 Vitis vinifera VIT_15s0021g02690 I 0.000
PIF7 Vitis vinifera VIT_17s0000g06930 I 0.000