LPERR06G02270 (Leersia perrieri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LPERR06G02270 T220255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT

AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.796 0.737
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN

NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.788 0.789
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN

NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.788 0.789
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV

BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.788 0.754
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN

NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.746 0.772
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW

WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.746 0.772
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN

NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.746 0.772
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN

NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.744 0.754
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD

HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.744 0.754
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN

NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.732 0.667
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV

BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.732 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR06G02270.1 Homeodomain 78 134

Links

Other Homeodomain family TFs
Other Leersia perrieri TFs

693 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACHR008952 Anopheles christyi ACHR008952 I 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
Alligator_sinensis_CCG011289.1 Alligator sinensis Alligator_sinensis_CCG011289.1 I 0.000
BGIBMGA001129 Bombyx mori BGIBMGA001129 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D917_06432 Trichinella nativa D917_06432 I 0.000
D918_02241 Trichuris suis D918_02241 I 0.000
ECANG7_01760 Echinococcus canadensis ECANG7_01760 I 0.000
TEAD3 Canis familiaris ENSCAFG00000001326 I 0.000
ENSCING00000019408 Ciona intestinalis ENSCING00000019408 I 0.000
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I 0.000
tead1a Danio rerio ENSDARG00000028159 I 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
Tead3 Dipodomys ordii ENSDORG00000010798 I 0.000
TEAD3 Equus caballus ENSECAG00000015056 I 0.000
TEAD3 Homo sapiens ENSG00000007866 D 0.000
TEAD4 Homo sapiens ENSG00000197905 D 0.000
TEAD4 Gasterosteus aculeatus ENSGACG00000003761 N 0.000
ENSGALG00000000953 Gallus gallus ENSGALG00000000953 I 0.000
TEAD3 Gorilla gorilla ENSGGOG00000001847 I 0.000
ENSGMOG00000015271 Gadus morhua ENSGMOG00000015271 I 0.000
TEAD3 Loxodonta africana ENSLAFG00000014818 I 0.000
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
TEAD1 Microcebus murinus ENSMICG00000007178 I 0.000
Tead4 Mus musculus ENSMUSG00000030353 D 0.000
ENSOARG00000012126 Ovis aries ENSOARG00000012126 I 0.000
TEAD3 Otolemur garnettii ENSOGAG00000002943 I 0.000
TEAD4 Oryzias latipes ENSORLG00000002553 I 0.000
ENSPFOG00000003170 Poecilia formosa ENSPFOG00000003170 I 0.000
ENSPFOG00000012196 Poecilia formosa ENSPFOG00000012196 N 0.000
ENSPSIG00000006176 Pelodiscus sinensis ENSPSIG00000006176 I 0.000
TEAD3 Taeniopygia guttata ENSTGUG00000001691 I 0.000
TEAD4 Tetraodon nigroviridis ENSTNIG00000003414 N 0.000
tead1b Tetraodon nigroviridis ENSTNIG00000009360 N 0.000
tead1a Takifugu rubripes ENSTRUG00000005940 I 0.000
tead3a Takifugu rubripes ENSTRUG00000011546 I 0.000
TEAD4 Takifugu rubripes ENSTRUG00000016489 I 0.000
tead1b Takifugu rubripes ENSTRUG00000017473 N 0.000
TEAD3 Tursiops truncatus ENSTTRG00000009434 I 0.000
ENSXMAG00000007292 Xiphophorus maculatus ENSXMAG00000007292 N 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
NEMVEDRAFT_v1g86806 Nematostella vectensis NEMVEDRAFT_v1g86806 I 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000
Pvit_05988 Pogona vitticeps Pvit_05988 I 0.000
SMAR011013 Strigamia maritima SMAR011013 I 0.000
TsM_000210300 Taenia solium TsM_000210300 I 0.000
egl-44 Caenorhabditis elegans WBGene00001208 I 0.000