LPERR07G23520 (Leersia perrieri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LPERR07G23520 T220271_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WOX11
M06916_2.00
Arabidopsis thaliana
ADTTAATTAVD

HBTAATTAAHT
Dap-seq
OMalley et al.(2016)
WOX11_col_a
0.808 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR07G23520.1 Homeodomain 20 81

Links

Other Homeodomain family TFs
Other Leersia perrieri TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_2DS_B5227B5F6 Triticum aestivum Traes_2DS_B5227B5F6 I 0.834
evm.TU.supercontig_73.3 Carica papaya evm.TU.supercontig_73.3 I 0.834
Eucgr.A02149 Eucalyptus grandis Eucgr.A02149 I 0.834
Traes_2BS_8A1FE01EE Triticum aestivum Traes_2BS_8A1FE01EE I 0.834
OS03G0325600 Oryza sativa OS03G0325600 I 0.834
Si039112m.g Setaria italica Si039112m.g I 0.834
GRMZM2G162481 Zea mays GRMZM2G162481 I 0.834
MTR_6g027390 Medicago truncatula MTR_6g027390 I 0.834
ORUFI07G27650 Oryza rufipogon ORUFI07G27650 I 0.834
Traes_4AS_EC04D9E8A Triticum aestivum Traes_4AS_EC04D9E8A I 0.834
F775_22811 Aegilops tauschii F775_22811 I 0.834
ORUFI03G16410 Oryza rufipogon ORUFI03G16410 I 0.834
GLYMA03G01000 Glycine max GLYMA03G01000 I 0.834
OPUNC07G25100 Oryza punctata OPUNC07G25100 I 0.834
Traes_4DL_5E79CC79C Triticum aestivum Traes_4DL_5E79CC79C I 0.834
MLOC_65745 Hordeum vulgare MLOC_65745 I 0.834
LPERR07G23470 Leersia perrieri LPERR07G23470 I 0.834
LPERR03G13850 Leersia perrieri LPERR03G13850 I 0.834
Si030836m.g Setaria italica Si030836m.g I 0.834
OPUNC03G15320 Oryza punctata OPUNC03G15320 I 0.834
OGLUM07G26700 Oryza glumaepatula OGLUM07G26700 I 0.834
OGLUM03G15990 Oryza glumaepatula OGLUM03G15990 I 0.834
Sb01g036670 Sorghum bicolor Sb01g036670 I 0.834
GLYMA19G29660 Glycine max GLYMA19G29660 I 0.834
ORGLA07G0211000 Oryza glaberrima ORGLA07G0211000 I 0.834
WOX11 Oryza sativa OS07G0684900 I 0.834
OMERI07G23310 Oryza meridionalis OMERI07G23310 I 0.834
AMTR_s00119p00100440 Amborella trichopoda AMTR_s00119p00100440 I 0.834
WOX6 Oryza indica BGIOSGA010824 I 0.834
OBART07G26670 Oryza barthii OBART07G26670 I 0.834
ORGLA03G0151500 Oryza glaberrima ORGLA03G0151500 I 0.834
Pavir.Ba00249 Panicum virgatum Pavir.Ba00249 I 0.834
ONIVA07G26430 Oryza nivara ONIVA07G26430 I 0.834
Pavir.Ia03448 Panicum virgatum Pavir.Ia03448 I 0.834
OBART03G15820 Oryza barthii OBART03G15820 I 0.834
BGIOSGA026413 Oryza indica BGIOSGA026413 I 0.834
Pavir.J23422 Panicum virgatum Pavir.J23422 I 0.834
Sb02g043300 Sorghum bicolor Sb02g043300 I 0.834
Ca_19701 Cicer arietinum Ca_19701 I 0.832
Ca_08180 Cicer arietinum Ca_08180 I 0.832
MTR_7g086940 Medicago truncatula MTR_7g086940 I 0.832
POPTR_0013s06310 Populus trichocarpa POPTR_0013s06310 I 0.832
POPTR_0019s05730 Populus trichocarpa POPTR_0019s05730 I 0.832
TCM_025805 Theobroma cacao TCM_025805 I 0.832
GSMUA_Achr6G15910_001 Musa acuminata GSMUA_Achr6G15910_001 I 0.832
GSMUA_Achr10G12820_001 Musa acuminata GSMUA_Achr10G12820_001 I 0.832
Cucsa.336980 Cucumis sativus Cucsa.336980 I 0.832
Gorai.013G196400 Gossypium raimondii Gorai.013G196400 I 0.832
30072.m000927 Ricinus communis 30072.m000927 I 0.832
Ciclev10021682m.g Citrus clementina Ciclev10021682m.g I 0.832
orange1.1g047211m.g Citrus sinensis orange1.1g047211m.g I 0.832
SapurV1A.0631s0110 Salix purpurea SapurV1A.0631s0110 I 0.832
LjT26C04.20.nd Lotus japonicus LjT26C04.20.nd I 0.832
LjSGA_037808.1 Lotus japonicus LjSGA_037808.1 I 0.832
SapurV1A.1660s0010 Salix purpurea SapurV1A.1660s0010 I 0.832
BRADI1G17420 Brachypodium distachyon BRADI1G17420 I 0.832
Gorai.007G346300 Gossypium raimondii Gorai.007G346300 I 0.832
Aquca_014_00949 Aquilegia coerulea Aquca_014_00949 I 0.832
mgf016673m Mimulus guttatus mgf016673m I 0.832
cassava15562.m1 Manihot esculenta cassava15562.m1 I 0.832
VIT_08s0056g01200 Vitis vinifera VIT_08s0056g01200 I 0.831
GSMUA_Achr8G01590_001 Musa acuminata GSMUA_Achr8G01590_001 I 0.824
gene30337-v1.0-hybrid Fragaria vesca gene30337-v1.0-hybrid I 0.819
MDP0000524885 Malus domestica MDP0000524885 I 0.819
PRUPE_ppa026303mg Prunus persica PRUPE_ppa026303mg I 0.819
MDP0000136426 Malus domestica MDP0000136426 I 0.819
TRIUR3_34808 Triticum urartu TRIUR3_34808 I 0.814
GSMUA_Achr9G05010_001 Musa acuminata GSMUA_Achr9G05010_001 I 0.813
Cagra.2098s0022 Capsella grandiflora Cagra.2098s0022 I 0.809
Bra036446 Brassica rapa Bra036446 I 0.809
Thhalv10022222m.g Eutrema salsugineum Thhalv10022222m.g I 0.809
Bostr.19046s0084 Boechera stricta Bostr.19046s0084 I 0.809
Thhalv10015651m.g Eutrema salsugineum Thhalv10015651m.g I 0.809
Bo1g153650 Brassica oleracea Bo1g153650 I 0.809
Carubv10016081m.g Capsella rubella Carubv10016081m.g I 0.809
WOX11 Arabidopsis lyrata fgenesh2_kg.3__312__AT3G03660.1 I 0.808
WOX11 Arabidopsis thaliana AT3G03660 D 0.808
PGSC0003DMG400027030 Solanum tuberosum PGSC0003DMG400027030 I 0.808
Solyc06g072890.1 Solanum lycopersicum Solyc06g072890.1 I 0.808
Bo5g148780 Brassica oleracea Bo5g148780 I 0.807
Cagra.6254s0027 Capsella grandiflora Cagra.6254s0027 I 0.807
Carubv10003719m.g Capsella rubella Carubv10003719m.g I 0.807
Bra031980 Brassica rapa Bra031980 I 0.807
GRMZM2G314064 Zea mays GRMZM2G314064 I 0.802
WOX12 Arabidopsis lyrata Al_scaffold_0006_1694 I 0.801
Bo9g159820 Brassica oleracea Bo9g159820 I 0.801
Bra002108 Brassica rapa Bra002108 I 0.801
WOX12 Arabidopsis thaliana AT5G17810 I 0.801
Pm025458 Prunus mume Pm025458 I 0.799
GSMUA_Achr5G27730_001 Musa acuminata GSMUA_Achr5G27730_001 I 0.792
Pavir.Fb01029 Panicum virgatum Pavir.Fb01029 I 0.789
ORGLA08G0063600 Oryza glaberrima ORGLA08G0063600 I 0.789
TRIUR3_34876 Triticum urartu TRIUR3_34876 I 0.789
TRAES3BF079200050CFD_g Triticum aestivum TRAES3BF079200050CFD_g I 0.789
ORUFI08G08400 Oryza rufipogon ORUFI08G08400 I 0.789
Si015065m.g Setaria italica Si015065m.g I 0.789
Sb07g007600 Sorghum bicolor Sb07g007600 I 0.789
WOX10 Oryza sativa OS08G0242400 I 0.789
GRMZM2G170958 Zea mays GRMZM2G170958 I 0.789
GSMUA_Achr3G09460_001 Musa acuminata GSMUA_Achr3G09460_001 I 0.789
MLOC_6669 Hordeum vulgare MLOC_6669 I 0.789
ONIVA08G08030 Oryza nivara ONIVA08G08030 I 0.789
F775_11947 Aegilops tauschii F775_11947 I 0.789
OGLUM08G08120 Oryza glumaepatula OGLUM08G08120 I 0.789
BRADI3G18800 Brachypodium distachyon BRADI3G18800 I 0.789
WOX10 Oryza indica BGIOSGA027391 I 0.789
GSMUA_Achr10G05090_001 Musa acuminata GSMUA_Achr10G05090_001 I 0.788
Pavir.J33010 Panicum virgatum Pavir.J33010 I 0.781
cassava4770.m1 Manihot esculenta cassava4770.m1 I 0.779
Bo2g062660 Brassica oleracea Bo2g062660 I 0.778
Bo2g013980 Brassica oleracea Bo2g013980 I 0.778
Bo11772s010 Brassica oleracea Bo11772s010 I 0.778
Bra023638 Brassica rapa Bra023638 I 0.778
mgf017527m Mimulus guttatus mgf017527m I 0.773
OB08G17020 Oryza brachyantha OB08G17020 I 0.767
Carubv10025224m.g Capsella rubella Carubv10025224m.g I 0.759
Cagra.1195s0012 Capsella grandiflora Cagra.1195s0012 I 0.759
Bostr.23794s0703 Boechera stricta Bostr.23794s0703 I 0.759
Ciclev10015562m.g Citrus clementina Ciclev10015562m.g I 0.759
POPTR_0011s05980 Populus trichocarpa POPTR_0011s05980 I 0.759
evm.TU.supercontig_7.12 Carica papaya evm.TU.supercontig_7.12 I 0.759
Bra022960 Brassica rapa Bra022960 I 0.759
OMERI01G23480 Oryza meridionalis OMERI01G23480 I 0.759
gene29786-v1.0-hybrid Fragaria vesca gene29786-v1.0-hybrid I 0.759
Aquca_036_00007 Aquilegia coerulea Aquca_036_00007 I 0.759
Cucsa.046640 Cucumis sativus Cucsa.046640 I 0.759
cassava4506.m1 Manihot esculenta cassava4506.m1 I 0.759
cassava40675.m1 Manihot esculenta cassava40675.m1 I 0.759
GLYMA13G24150 Glycine max GLYMA13G24150 I 0.759
mgf001579m Mimulus guttatus mgf001579m I 0.759
GLYMA10G08030 Glycine max GLYMA10G08030 I 0.759
WOX9 Arabidopsis lyrata Al_scaffold_0004_1872 I 0.759
GLYMA13G21860 Glycine max GLYMA13G21860 I 0.759
Bra005464 Brassica rapa Bra005464 I 0.759
Gorai.011G031300 Gossypium raimondii Gorai.011G031300 I 0.759
SapurV1A.0270s0270 Salix purpurea SapurV1A.0270s0270 I 0.759
SapurV1A.0012s0880 Salix purpurea SapurV1A.0012s0880 I 0.759
ORGLA01G0211300 Oryza glaberrima ORGLA01G0211300 I 0.759
BGIOSGA001059 Oryza indica BGIOSGA001059 I 0.759
Thhalv10016784m.g Eutrema salsugineum Thhalv10016784m.g I 0.759
AMTR_s00021p00189010 Amborella trichopoda AMTR_s00021p00189010 I 0.759
WOX9 Arabidopsis thaliana AT2G33880 I 0.759
CM1489.70.nc Lotus japonicus CM1489.70.nc I 0.759
PGSC0003DMG400010725 Solanum tuberosum PGSC0003DMG400010725 I 0.759
POPTR_0004s05090 Populus trichocarpa POPTR_0004s05090 I 0.759
MDP0000232004 Malus domestica MDP0000232004 I 0.759
Lus10005282.g Linum usitatissimum Lus10005282.g I 0.759
GRMZM2G031882 Zea mays GRMZM2G031882 I 0.759
Bo4g041330 Brassica oleracea Bo4g041330 I 0.759
MDP0000729328 Malus domestica MDP0000729328 I 0.759
Pavir.Eb02702 Panicum virgatum Pavir.Eb02702 I 0.759
Bo3g027500 Brassica oleracea Bo3g027500 I 0.759
orange1.1g036145m.g Citrus sinensis orange1.1g036145m.g I 0.759
Gorai.009G165700 Gossypium raimondii Gorai.009G165700 I 0.759
GLYMA07G32430 Glycine max GLYMA07G32430 I 0.759
GRMZM2G133972 Zea mays GRMZM2G133972 I 0.759
MTR_7g025010 Medicago truncatula MTR_7g025010 I 0.759
MTR_2g015000 Medicago truncatula MTR_2g015000 I 0.759
LPERR01G22080 Leersia perrieri LPERR01G22080 I 0.759
GSMUA_Achr9G06660_001 Musa acuminata GSMUA_Achr9G06660_001 I 0.759
Solyc02g077390.1 Solanum lycopersicum Solyc02g077390.1 I 0.759
OB01G35000 Oryza brachyantha OB01G35000 I 0.759
ONIVA01G29060 Oryza nivara ONIVA01G29060 I 0.759
PRUPE_ppa019841mg Prunus persica PRUPE_ppa019841mg I 0.759
OGLUM01G29670 Oryza glumaepatula OGLUM01G29670 I 0.759
OBART01G25820 Oryza barthii OBART01G25820 I 0.759
GSMUA_Achr8G27170_001 Musa acuminata GSMUA_Achr8G27170_001 I 0.759
TCM_029776 Theobroma cacao TCM_029776 I 0.759
29900.m001555 Ricinus communis 29900.m001555 I 0.759
VIT_10s0003g00560 Vitis vinifera VIT_10s0003g00560 I 0.759
Ca_00357 Cicer arietinum Ca_00357 I 0.759
Ca_06365 Cicer arietinum Ca_06365 I 0.759
Pm010370 Prunus mume Pm010370 I 0.759
OS01G0667450 Oryza sativa OS01G0667450 I 0.759
Cla009819 Citrullus lanatus Cla009819 I 0.759
Eucgr.D00577 Eucalyptus grandis Eucgr.D00577 I 0.758
gene28935-v1.0-hybrid Fragaria vesca gene28935-v1.0-hybrid I 0.757
Si004249m.g Setaria italica Si004249m.g I 0.754
TRAES3BF022100010CFD_g Triticum aestivum TRAES3BF022100010CFD_g I 0.754
MLOC_7925 Hordeum vulgare MLOC_7925 I 0.754
Pavir.Ib01521 Panicum virgatum Pavir.Ib01521 I 0.750
BGIOSGA020366 Oryza indica BGIOSGA020366 I 0.743
ONIVA05G27800 Oryza nivara ONIVA05G27800 I 0.743
OS05G0564500 Oryza sativa OS05G0564500 I 0.743
F775_23099 Aegilops tauschii F775_23099 I 0.743
ORGLA05G0223800 Oryza glaberrima ORGLA05G0223800 I 0.743
OBART05G25900 Oryza barthii OBART05G25900 I 0.743
ORUFI05G27780 Oryza rufipogon ORUFI05G27780 I 0.743
OGLUM05G27500 Oryza glumaepatula OGLUM05G27500 I 0.743
OPUNC05G23480 Oryza punctata OPUNC05G23480 I 0.743
OB10G14840 Oryza brachyantha OB10G14840 I 0.739
Bo2g127670 Brassica oleracea Bo2g127670 I 0.723
WOX8 Arabidopsis lyrata scaffold_800245.1 I 0.723
Cagra.2097s0014 Capsella grandiflora Cagra.2097s0014 I 0.723
Bra022008 Brassica rapa Bra022008 I 0.723
Carubv10027735m.g Capsella rubella Carubv10027735m.g I 0.723
Bostr.8819s0128 Boechera stricta Bostr.8819s0128 I 0.723
WOX8 Arabidopsis thaliana AT5G45980 I 0.718
Sb09g028562 Sorghum bicolor Sb09g028562 I 0.710
Si025013m.g Setaria italica Si025013m.g I 0.710
Pavir.Ca00938 Panicum virgatum Pavir.Ca00938 I 0.710
GRMZM2G409881 Zea mays GRMZM2G409881 I 0.710
PDK_20s13009443g001 Phoenix dactylifera PDK_20s13009443g001 I 0.708
Thhalv10001099m.g Eutrema salsugineum Thhalv10001099m.g I 0.702
PDK_20s1465351g003 Phoenix dactylifera PDK_20s1465351g003 I 0.654
Bra017448 Brassica rapa Bra017448 I 0.642
Bo9g070070 Brassica oleracea Bo9g070070 I 0.642
MTR_4g088080 Medicago truncatula MTR_4g088080 I 0.638
OS07G0533201 Oryza sativa OS07G0533201 N 0.621
OMERI07G13960 Oryza meridionalis OMERI07G13960 N 0.621
MTR_4g088070 Medicago truncatula MTR_4g088070 I 0.621
ORGLA07G0240100 Oryza glaberrima ORGLA07G0240100 N 0.621
SELMODRAFT_115439 Selaginella moellendorffii SELMODRAFT_115439 I 0.618
SELMODRAFT_123325 Selaginella moellendorffii SELMODRAFT_123325 I 0.618
Bra026791 Brassica rapa Bra026791 I 0.601
Bo8g106350 Brassica oleracea Bo8g106350 I 0.601
Thhalv10009654m.g Eutrema salsugineum Thhalv10009654m.g I 0.601
SELMODRAFT_419270 Selaginella moellendorffii SELMODRAFT_419270 I 0.600
SELMODRAFT_417553 Selaginella moellendorffii SELMODRAFT_417553 I 0.600