LPERR10G06660 (Leersia perrieri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LPERR10G06660 T220287_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.857 0.857
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.857 0.857
estExt_gwp_gw1.C_70211
M02220_2.00
Physcomitrella patens
HMATNANDNN

NNHNTNATKD
PBM
Weirauch et al.(2014)
pTH8489
0.829 0.839
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.817 0.804
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.817 0.804
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.817 0.804
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.817 0.804
ATHB-16
M02050_2.00
Arabidopsis thaliana
YAATMATT

AATKATTR
PBM
Weirauch et al.(2014)
pTH7270
0.800 0.768
HAT5
M06914_2.00
Arabidopsis thaliana
NHAATAATTDW

WHAATTATTDN
Dap-seq
OMalley et al.(2016)
HAT5_col_a
0.796 0.804
HAT5
M06915_2.00
Arabidopsis thaliana
WNYAATAATTRWDN

NHWYAATTATTRNW
Dap-seq
OMalley et al.(2016)
HAT5_colamp_a
0.796 0.804
HAT5
M02683_2.00
Arabidopsis thaliana
SCAATAATTNNV

BNNAATTATTGS
SELEX
Mathelier et al.(2014)
MA0008.2
0.796 0.804
HAT5
M10624_2.00
Arabidopsis thaliana
YSCAATAATTNNVN

NBNNAATTATTGSR
Transfac
Matys et al.(2006)
P$ATHB1_01
0.796 0.804
ATHB-6
M02040_2.00
Arabidopsis thaliana
HATNATTDN

NHAATNATD
PBM
Weirauch et al.(2014)
pTH7670
0.796 0.768
ATHB-6
M06909_2.00
Arabidopsis thaliana
NNNHATKATTR

YAATMATDNNN
Dap-seq
OMalley et al.(2016)
ATHB6_col_a
0.796 0.768
ATHB-6
M06910_2.00
Arabidopsis thaliana
NCAATAATTRN

NYAATTATTGN
Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a
0.796 0.768
ATHB-21
M06907_2.00
Arabidopsis thaliana
NNWHCAATWATTDN

NHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB21_col_a
0.738 0.696
ATHB-21
M06908_2.00
Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN

NNAHCAATWATTDNNNHHWW
Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a
0.738 0.696
HB-5
M06924_2.00
Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH

DWWDNNNHMAATWATTGDTNN
Dap-seq
OMalley et al.(2016)
ATHB40_col_a
0.736 0.643
HB-5
M06925_2.00
Arabidopsis thaliana
HHAATWATTGDWNN

NNWHCAATWATTDD
Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a
0.736 0.643
ATHB-53
M06934_2.00
Arabidopsis thaliana
HMAATAATTRD

HYAATTATTKD
Dap-seq
OMalley et al.(2016)
ATHB53_col_a
0.731 0.607
ATHB-53
M06935_2.00
Arabidopsis thaliana
NNWHCAATWATTDDN

NHHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a
0.731 0.607
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.719 0.857
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.719 0.857
ATHB-20
M06912_2.00
Arabidopsis thaliana
HYAATAATTRD

HYAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_col_a
0.698 0.804
ATHB-20
M06913_2.00
Arabidopsis thaliana
HYAATMATTRD

HYAATKATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a
0.698 0.804
ATHB-7
M02043_2.00
Arabidopsis thaliana
NHWTGATTGN

NCAATCAWDN
PBM
Weirauch et al.(2014)
pTH8090
0.604 0.661
ATHB-7
M06911_2.00
Arabidopsis thaliana
NHYCAATCATTSW

WSAATGATTGRDN
Dap-seq
OMalley et al.(2016)
ATHB7_col_a
0.604 0.661
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR10G06660.1 Homeodomain 106 161

Links

Other Homeodomain family TFs
Other Leersia perrieri TFs

819 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG003052.1 Alligator sinensis Alligator_sinensis_CCG003052.1 I 0.000
CAA76309 Xenopus laevis CAA76309 I 0.000
ENSAMEG00000007625 Ailuropoda melanoleuca ENSAMEG00000007625 I 0.000
CEBPE Bos taurus ENSBTAG00000005952 I 0.000
ENSCAFG00000011433 Canis familiaris ENSCAFG00000011433 I 0.000
c/ebpalpha/gamma Ciona intestinalis ENSCING00000012798 N 0.000
CEBPE Callithrix jacchus ENSCJAG00000008065 I 0.000
CEBPE Cavia porcellus ENSCPOG00000014049 I 0.000
ENSCSAG00000016086 Chlorocebus sabaeus ENSCSAG00000016086 I 0.000
CEBPE Equus caballus ENSECAG00000012883 I 0.000
CEBPE Erinaceus europaeus ENSEEUG00000005848 I 0.000
CEBPE Echinops telfairi ENSETEG00000000035 I 0.000
CEBPE Felis catus ENSFCAG00000002334 I 0.000
CEBPE Homo sapiens ENSG00000092067 D 0.000
CEBPE Gorilla gorilla ENSGGOG00000007419 I 0.000
ENSLACG00000002076 Latimeria chalumnae ENSLACG00000002076 I 0.000
CEBPE Loxodonta africana ENSLAFG00000031400 I 0.000
ENSLOCG00000018358 Lepisosteus oculatus ENSLOCG00000018358 I 0.000
ENSMICG00000002591 Microcebus murinus ENSMICG00000002591 I 0.000
CEBPE Myotis lucifugus ENSMLUG00000030209 I 0.000
CEBPE Macaca mulatta ENSMMUG00000019652 I 0.000
CEBPE Monodelphis domestica ENSMODG00000004586 I 0.000
ENSMPUG00000006815 Mustela putorius furo ENSMPUG00000006815 I 0.000
Cebpe Mus musculus ENSMUSG00000052435 D 0.000
ENSNLEG00000014958 Nomascus leucogenys ENSNLEG00000014958 I 0.000
ENSOANG00000007645 Ornithorhynchus anatinus ENSOANG00000007645 I 0.000
ENSOARG00000019360 Ovis aries ENSOARG00000019360 I 0.000
CEBPE Oryctolagus cuniculus ENSOCUG00000022235 I 0.000
CEBPE Otolemur garnettii ENSOGAG00000001312 I 0.000
ENSP00000206513 Macaca fascicularis ENSP00000206513 I 0.000
ENSP00000206513-D1 Bos grunniens ENSP00000206513-D1 I 0.000
ENSPANG00000019646 Papio anubis ENSPANG00000019646 I 0.000
CEBPE Procavia capensis ENSPCAG00000015039 I 0.000
ENSPPYG00000005659 Pongo abelii ENSPPYG00000005659 I 0.000
CEBPE Pan troglodytes ENSPTRG00000006162 I 0.000
Cebpe Rattus norvegicus ENSRNOG00000014282 I 0.000
ENSSHAG00000013989 Sarcophilus harrisii ENSSHAG00000013989 I 0.000
CEBPE Sus scrofa ENSSSCG00000002033 I 0.000
ENSSTOG00000007204 Ictidomys tridecemlineatus ENSSTOG00000007204 I 0.000
ENSTBEG00000017246 Tupaia belangeri ENSTBEG00000017246 I 0.000
CEBPE Tursiops truncatus ENSTTRG00000017229 I 0.000
HHAL004160-PA Halyomorpha halys HHAL004160-PA I 0.000
ISCW019431 Ixodes scapularis ISCW019431 N 0.000
Myotis_brandtii_CEBPE_10009435 Myotis brandtii Myotis_brandtii_CEBPE_10009435 I 0.000
Pvit_03335 Pogona vitticeps Pvit_03335 I 0.000
tetur13g00160 Tetranychus urticae tetur13g00160 N 0.000
cebpb Xenopus tropicalis XB-GENE-479779 I 0.000
cebpa Xenopus tropicalis XB-GENE-853397 I 0.000
cebpe Xenopus tropicalis XB-GENE-853430 I 0.000
cebpb.L Xenopus laevis XB-GENE-865306 I 0.000