CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MESCA000707
(
Megaselia scalaris
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
MESCA000707
T220540_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pbx1
M09213_2.00
Mus musculus
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A
0.750
0.925
exd
M06487_2.00
Drosophila melanogaster
YRTCAAAN
NTTTGAYR
B1H
Mathelier et al.(2014)
MA0222.1
0.306
1.000
exd
M06243_2.00
Drosophila melanogaster
YRTCAAAN
NTTTGAYR
B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611
0.306
1.000
exd
M06244_2.00
Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN
B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611
0.306
1.000
exd
M06245_2.00
Drosophila melanogaster
NDTGAYRW
WYRTCAHN
B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611
0.306
1.000
exd
M06246_2.00
Drosophila melanogaster
NNDTGAYR
YRTCAHNN
B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611
0.306
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MESCA000707-PA
Homeodomain
113
155
RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGIT
Links
Other
Homeodomain
family TFs
Other
Megaselia scalaris
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy