MLOC_67600 (Hordeum vulgare)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MLOC_67600 T220719_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.751 0.649
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.751 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_67600.1 Homeodomain 90 151

Links

Other Homeodomain family TFs
Other Hordeum vulgare TFs

448 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00087p00039380 Amborella trichopoda AMTR_s00087p00039380 N 0.000
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.000
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.000
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.000
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.000
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.000
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N 0.000
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.000
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.000
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N 0.000
MDP0000413041 Malus domestica MDP0000413041 N 0.000
MDP0000879675 Malus domestica MDP0000879675 N 0.000
mgf023771m Mimulus guttatus mgf023771m N 0.000
MLOC_23224 Hordeum vulgare MLOC_23224 N 0.000
MLOC_52896 Hordeum vulgare MLOC_52896 I 0.000
MLOC_71332 Hordeum vulgare MLOC_71332 N 0.000
OB06G28240 Oryza brachyantha OB06G28240 N 0.000
OGLUM11G01380 Oryza glumaepatula OGLUM11G01380 N 0.000
OLONG_025203 Oryza longistaminata OLONG_025203 N 0.000
OPUNC01G25350 Oryza punctata OPUNC01G25350 N 0.000
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.000
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.000
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.000
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.000
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.000
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.000
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.000
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.000
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.000
TCM_041010 Theobroma cacao TCM_041010 I 0.000
Traes_3AL_F09C7CA19 Triticum aestivum Traes_3AL_F09C7CA19 N 0.000
Traes_3DL_D9A29948B Triticum aestivum Traes_3DL_D9A29948B N 0.000
Traes_4AL_17C974117 Triticum aestivum Traes_4AL_17C974117 N 0.000
Traes_6AL_C0A2B4F041 Triticum aestivum Traes_6AL_C0A2B4F041 N 0.000
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.000
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.000