CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_67600
(
Hordeum vulgare
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
MLOC_67600
T220719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.751
0.649
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.751
0.649
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_67600.1
Homeodomain
90
151
GTTRWNPSAEQIKVLEALYRGGMRTPNSAQIERITEELGRHGRIEGKNVFYWFQNHKARERQ
Links
Other
Homeodomain
family TFs
Other
Hordeum vulgare
TFs
448 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00087p00039380
Amborella trichopoda
AMTR_s00087p00039380
N
0.000
ATMYB16
Arabidopsis thaliana
AT5G15310
I
0.000
Cagra.0876s0043
Capsella grandiflora
Cagra.0876s0043
N
0.000
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
0.000
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
0.000
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
0.000
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
0.000
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
0.000
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
0.000
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
0.000
MDP0000413041
Malus domestica
MDP0000413041
N
0.000
MDP0000879675
Malus domestica
MDP0000879675
N
0.000
mgf023771m
Mimulus guttatus
mgf023771m
N
0.000
MLOC_23224
Hordeum vulgare
MLOC_23224
N
0.000
MLOC_52896
Hordeum vulgare
MLOC_52896
I
0.000
MLOC_71332
Hordeum vulgare
MLOC_71332
N
0.000
OB06G28240
Oryza brachyantha
OB06G28240
N
0.000
OGLUM11G01380
Oryza glumaepatula
OGLUM11G01380
N
0.000
OLONG_025203
Oryza longistaminata
OLONG_025203
N
0.000
OPUNC01G25350
Oryza punctata
OPUNC01G25350
N
0.000
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
0.000
Pavir.Eb00654
Panicum virgatum
Pavir.Eb00654
I
0.000
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.000
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
0.000
PGSC0003DMG400014550
Solanum tuberosum
PGSC0003DMG400014550
I
0.000
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.000
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
0.000
SapurV1A.0006s0790
Salix purpurea
SapurV1A.0006s0790
I
0.000
SapurV1A.0021s0930
Salix purpurea
SapurV1A.0021s0930
I
0.000
TCM_041010
Theobroma cacao
TCM_041010
I
0.000
Traes_3AL_F09C7CA19
Triticum aestivum
Traes_3AL_F09C7CA19
N
0.000
Traes_3DL_D9A29948B
Triticum aestivum
Traes_3DL_D9A29948B
N
0.000
Traes_4AL_17C974117
Triticum aestivum
Traes_4AL_17C974117
N
0.000
Traes_6AL_C0A2B4F041
Triticum aestivum
Traes_6AL_C0A2B4F041
N
0.000
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
0.000
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N
0.000