MTR_3g045830 (Medicago truncatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MTR_3g045830 T220794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.637 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH33549 Homeodomain 19 75

Links

Other Homeodomain family TFs
Other Medicago truncatula TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.831
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.831
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.831
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.829
MDP0000207866 Malus domestica MDP0000207866 I 0.820
Cla008712 Citrullus lanatus Cla008712 I 0.819
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.816
Ca_21400 Cicer arietinum Ca_21400 I 0.796
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.794
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.750
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.750
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.750
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.750
Bo9g006450 Brassica oleracea Bo9g006450 I 0.745
Bra034196 Brassica rapa Bra034196 I 0.745
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.702
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.702
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.697
PDK_20s1402391g002 Phoenix dactylifera PDK_20s1402391g002 I 0.697
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.690
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.690
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.690
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.690
29983.m003128 Ricinus communis 29983.m003128 I 0.690
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.690
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.690
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.690
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.690
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.690
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.690
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.690
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.690
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.690
Bo7g067190 Brassica oleracea Bo7g067190 I 0.690
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.690
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.690
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.690
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.690
Bra033725 Brassica rapa Bra033725 I 0.690
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.680
RLT2 Arabidopsis thaliana AT5G44180 I 0.674
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.670
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.670
GLYMA08G41330 Glycine max GLYMA08G41330 I 0.666
GLYMA18G14910 Glycine max GLYMA18G14910 I 0.666
PK06068.1 Cannabis sativa PK06068.1 I 0.657
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.657
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.657
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.657
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.657
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.657
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.657
Ca_11272 Cicer arietinum Ca_11272 I 0.657
TCM_008214 Theobroma cacao TCM_008214 I 0.657
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.644
PK25011.1 Cannabis sativa PK25011.1 D 0.637
Lus10017688.g Linum usitatissimum Lus10017688.g N 0.631
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.627
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I 0.622
Eucgr.J00701 Eucalyptus grandis Eucgr.J00701 I 0.622
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.619
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.611
cassava16534.m1 Manihot esculenta cassava16534.m1 I 0.607
Solyc11g065110.1 Solanum lycopersicum Solyc11g065110.1 I 0.602