NEMVEDRAFT_v1g101664 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g101664 T220966_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEMVEDRAFT_v1g101664
M02142_2.00		 Nematostella vectensis
WATCRATC
GATYGATW		 PBM
Weirauch et al.(2014)
pTH5552		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q0N4H9_NEMVE
M02165_2.00 		Nematostella vectensis
NNYRWWNNN
NNNWWYRNN		 PBM
Weirauch et al.(2014)
pTH6101 		0.609 0.526
NEMVEDRAFT_v1g129868
M02146_2.00 		Nematostella vectensis
NYRAWNDNN
NNHNWTYRN		 PBM
Weirauch et al.(2014)
pTH5749 		0.605 0.491
CBG20882
M01244_2.00 		Caenorhabditis briggsae
NDHDATDRN
NYHATHDHN		 PBM
Lambert et al.(2019)
pTH11477 		0.604 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02142_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
EDO42162 Homeodomain 2 58

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

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35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action