NEMVEDRAFT_v1g101664 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g101664 T220966_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEMVEDRAFT_v1g101664
M02142_2.00
Nematostella vectensis
WATCRATC

GATYGATW
PBM
Weirauch et al.(2014)
pTH5552
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q0N4H9_NEMVE
M02165_2.00
Nematostella vectensis
NNYRWWNNN

NNNWWYRNN
PBM
Weirauch et al.(2014)
pTH6101
0.609 0.526
NEMVEDRAFT_v1g129868
M02146_2.00
Nematostella vectensis
NYRAWNDNN

NNHNWTYRN
PBM
Weirauch et al.(2014)
pTH5749
0.605 0.491
CBG20882
M01244_2.00
Caenorhabditis briggsae
NDHDATDRN

NYHATHDHN
PBM
Lambert et al.(2019)
pTH11477
0.604 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02142_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
EDO42162 Homeodomain 2 58

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SELMODRAFT_412282 Selaginella moellendorffii SELMODRAFT_412282 N 0.000
SELMODRAFT_429869 Selaginella moellendorffii SELMODRAFT_429869 N 0.000