NEMVEDRAFT_v1g114268 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g114268 T220980_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEMVEDRAFT_v1g114268
M02145_2.00		 Nematostella vectensis
WTAATBGRT
AYCVATTAW		 PBM
Weirauch et al.(2014)
pTH6514		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q0N4H7_NEMVE
M02164_2.00 		Nematostella vectensis
NNDAYNDNNN
NNNHNRTHNN		 PBM
Weirauch et al.(2014)
pTH6472 		0.860 0.947
Q0N4H2_NEMVE
M02163_2.00 		Nematostella vectensis
TAATYRVT
ABYRATTA		 PBM
Weirauch et al.(2014)
pTH6303 		0.713 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02145_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
EDO38251 Homeodomain 30 86

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

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40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action