CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g150808
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEMVEDRAFT_v1g150808
T221006_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Duxbl1
M02099_2.00
Mus musculus
NTGATTRNN
NNYAATCAN
PBM
Weirauch et al.(2014)
pTH6453
0.676
0.630
ESX1
M00291_2.00
Homo sapiens
NNTRATNRN
NYNATYANN
PBM
Barrera et al.(2016)
ESX1_K193R
0.621
0.481
Q4RRY4_TETNG
M02169_2.00
Tetraodon nigroviridis
NNYAATYAN
NTRATTRNN
PBM
Weirauch et al.(2014)
pTH6326
0.621
0.537
ENSTNIG00000017092
M02109_2.00
Tetraodon nigroviridis
YYAATCAD
HTGATTRR
PBM
Weirauch et al.(2014)
pTH6064
0.615
0.500
mixl1.S
M02233_2.00
Xenopus laevis
NHTAATTAANN
NNTTAATTADN
PBM
Weirauch et al.(2014)
pTH6163
0.602
0.593
Q9C1N5_COPSC
M02216_2.00
Coprinopsis scobicola
NBCAATCVN
NBGATTGVN
PBM
Weirauch et al.(2014)
pTH5843
0.600
0.444
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO27518
Homeodomain
15
68
RRQRTFFLKEQTVILEGAFQYERFPGIQIREKLARELDIDESRIQVWFQNRRSR
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEMVEDRAFT_v1g92347
Nematostella vectensis
NEMVEDRAFT_v1g92347
I
0.810
ENSTSYG00000014223
Tarsius syrichta
ENSTSYG00000014223
I
0.717
PHOX2B
Loxodonta africana
ENSLAFG00000022070
I
0.714
estExt_fgenesh2_pg.C_600126
Branchiostoma floridae
estExt_fgenesh2_pg.C_600126
I
0.709
LotgiG80580
Lottia gigantea
LotgiG80580
I
0.699
LotgiG80535
Lottia gigantea
LotgiG80535
I
0.699
LotgiG100384
Lottia gigantea
LotgiG100384
I
0.699
LotgiG100387
Lottia gigantea
LotgiG100387
I
0.699
AAEL008266
Aedes aegypti
AAEL008266
I
0.698
NEMVEDRAFT_v1g233675
Nematostella vectensis
NEMVEDRAFT_v1g233675
I
0.685
O9G_003621
Rozella allomycis
O9G_003621
I
0.682
ENSOANG00000003281
Ornithorhynchus anatinus
ENSOANG00000003281
I
0.671
sia1.L
Xenopus laevis
XB-GENE-864865
I
0.670
sia1
Xenopus tropicalis
XB-GENE-482368
I
0.670
sia2
Xenopus tropicalis
XB-GENE-482070
I
0.670
CapteG129681
Capitella teleta
CapteG129681
I
0.668
ENSMODG00000028206
Monodelphis domestica
ENSMODG00000028206
I
0.650
ENSMODG00000029013
Monodelphis domestica
ENSMODG00000029013
I
0.650
sia3
Xenopus tropicalis
XB-GENE-480406
I
0.649
NEMVEDRAFT_v1g69041
Nematostella vectensis
NEMVEDRAFT_v1g69041
I
0.649
Sakowv30037714m.g
Saccoglossus kowalevskii
Sakowv30037714m.g
I
0.645
Sakowv30037724m.g
Saccoglossus kowalevskii
Sakowv30037724m.g
I
0.645
Sakowv30037725m.g
Saccoglossus kowalevskii
Sakowv30037725m.g
I
0.645
ENSMLUG00000028989
Myotis lucifugus
ENSMLUG00000028989
I
0.644
RSKR_0000220300
Rhabditophanes kr3021
RSKR_0000220300
I
0.641
PPA16557
Pristionchus pacificus
PPA16557
I
0.640
ENSFALG00000004733
Ficedula albicollis
ENSFALG00000004733
I
0.639
bix1.2.S
Xenopus laevis
XB-GENE-6252895
I
0.633
bix1.1
Xenopus tropicalis
XB-GENE-482521
I
0.632
AAZ04406
Xenopus tropicalis
AAZ04406
I
0.632
AAZ04407
Xenopus tropicalis
AAZ04407
I
0.632
XP_002941181
Xenopus tropicalis
XP_002941181
I
0.632
Hba_20723
Heterorhabditis bacteriophora
Hba_20723
I
0.632
XP_002941810
Xenopus tropicalis
XP_002941810
I
0.631
WUBG_10381
Wuchereria bancrofti
WUBG_10381
I
0.628
TCLT_0000189001
Thelazia callipaeda
TCLT_0000189001
I
0.628
OFLC_0000389601
Onchocerca flexuosa
OFLC_0000389601
I
0.628
nOo.2.0.1.g10062
Onchocerca ochengi
nOo.2.0.1.g10062
I
0.628
WBGene00244975
Onchocerca volvulus
WBGene00244975
I
0.628
nDi.2.2.2.g00432
Dirofilaria immitis
nDi.2.2.2.g00432
I
0.628
Bm7522
Brugia malayi
Bm7522
I
0.628
nLs.2.1.2.g09340
Litomosoides sigmodontis
nLs.2.1.2.g09340
I
0.628
bix1.3.S
Xenopus laevis
XB-GENE-6252030
I
0.628
nAv.1.0.1.g03426
Acanthocheilonema viteae
nAv.1.0.1.g03426
I
0.628
LOAG_06831
Loa loa
LOAG_06831
I
0.628
BTMF_0001439101
Brugia timori
BTMF_0001439101
I
0.628
DME_0000392201
Dracunculus medinensis
DME_0000392201
I
0.628
ASU_04225
Ascaris suum
ASU_04225
I
0.628
EEL_0001067901
Elaeophora elaphi
EEL_0001067901
I
0.628
ASIM_0000837901
Anisakis simplex
ASIM_0000837901
I
0.628
ALUE_0001674701
Ascaris lumbricoides
ALUE_0001674701
I
0.628
bix1.3.L
Xenopus laevis
XB-GENE-6485514
I
0.627
Sakowv30037729m.g
Saccoglossus kowalevskii
Sakowv30037729m.g
I
0.627
bix1.1.L
Xenopus laevis
XB-GENE-6252894
I
0.627
SPU_008112
Strongylocentrotus purpuratus
SPU_008112
I
0.626
ENSPSIG00000017976
Pelodiscus sinensis
ENSPSIG00000017976
I
0.625
ENSMEUG00000004940
Macropus eugenii
ENSMEUG00000004940
I
0.625
ENSSHAG00000012656
Sarcophilus harrisii
ENSSHAG00000012656
I
0.625
SEBOX
Monodelphis domestica
ENSMODG00000019242
I
0.625
sia2.S
Xenopus laevis
XB-GENE-864825
I
0.625
ENSTRUG00000012518
Takifugu rubripes
ENSTRUG00000012518
I
0.621
Q4RRY4_TETNG
Tetraodon nigroviridis
Q4RRY4_TETNG
D
0.621
CJA08488
Caenorhabditis japonica
CJA08488
I
0.619
ENSGMOG00000001710
Gadus morhua
ENSGMOG00000001710
I
0.616
ENSAMXG00000021537
Astyanax mexicanus
ENSAMXG00000021537
I
0.615
ENSXMAG00000007518
Xiphophorus maculatus
ENSXMAG00000007518
I
0.615
ENSPFOG00000004918
Poecilia formosa
ENSPFOG00000004918
I
0.615
ENSORLG00000000457
Oryzias latipes
ENSORLG00000000457
I
0.615
ENSTRUG00000009443
Takifugu rubripes
ENSTRUG00000009443
I
0.615
ENSTNIG00000017092
Tetraodon nigroviridis
ENSTNIG00000017092
D
0.615
mxtx1
Danio rerio
ENSDARG00000069382
I
0.615
ENSGACG00000003944
Gasterosteus aculeatus
ENSGACG00000003944
I
0.615
EVEC_0001106101
Enterobius vermicularis
EVEC_0001106101
I
0.613
ENSCHOG00000002375
Choloepus hoffmanni
ENSCHOG00000002375
I
0.611
ACYPI087925
Acyrthosiphon pisum
ACYPI087925
I
0.611
ML12641a
Mnemiopsis leidyi
ML12641a
I
0.611
AEPI010961
Anopheles epiroticus
AEPI010961
I
0.608
Aqu1.213968
Amphimedon queenslandica
Aqu1.213968
I
0.608
ENSMPUG00000006459
Mustela putorius furo
ENSMPUG00000006459
I
0.608
ML12598a
Mnemiopsis leidyi
ML12598a
I
0.608
Aqu1.203623
Amphimedon queenslandica
Aqu1.203623
I
0.608
TRE_0000490001
Trichobilharzia regenti
TRE_0000490001
I
0.607
TriadG9493
Trichoplax adhaerens
TriadG9493
I
0.607
RSKR_0000047500
Rhabditophanes kr3021
RSKR_0000047500
I
0.607
TTAC_0000844001
Hydatigera taeniaeformis
TTAC_0000844001
I
0.607
ENSLOCG00000005394
Lepisosteus oculatus
ENSLOCG00000005394
I
0.605
SPU_012631
Strongylocentrotus purpuratus
SPU_012631
I
0.605
ENSPSIG00000005438
Pelodiscus sinensis
ENSPSIG00000005438
I
0.604
mxtx2
Danio rerio
ENSDARG00000015906
I
0.604
ENSAMXG00000011097
Astyanax mexicanus
ENSAMXG00000011097
I
0.604
RSKR_0000962500
Rhabditophanes kr3021
RSKR_0000962500
I
0.602
AAZ04405
Xenopus tropicalis
AAZ04405
I
0.602
mixl1.S
Xenopus laevis
XB-GENE-865559
D
0.602
mixl1
Xenopus tropicalis
XB-GENE-485898
I
0.602
AAI58894
Xenopus tropicalis
AAI58894
I
0.602
mixl1.L
Xenopus laevis
XB-GENE-6254430
I
0.602
Q9C1N5_COPSC
Coprinopsis scobicola
Q9C1N5_COPSC
D
0.600
LotgiG80576
Lottia gigantea
LotgiG80576
I
0.600
NEMVEDRAFT_v1g49015
Nematostella vectensis
NEMVEDRAFT_v1g49015
I
0.599
NEMVEDRAFT_v1g48953
Nematostella vectensis
NEMVEDRAFT_v1g48953
I
0.599