NEMVEDRAFT_v1g38792 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g38792 T221046_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN

NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.659 0.514
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN

NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.659 0.514
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA

TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.659 0.514
DUXA
M10756_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.659 0.514
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA

TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.659 0.514
DUX4
M08135_2.00
Homo sapiens
TAAYYYAATCA

TGATTRRRTTA
ChIP-seq
Mathelier et al.(2014)
MA0468.1
0.645 0.523
DUX4
M09167_2.00
Homo sapiens
TAAYYYAATCA

TGATTRRRTTA
Misc
Kulakovskiy et al.(2013)
DUX4_HUMAN.H11MO.0.A
0.645 0.523
DUX4
M10757_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUX4_01
0.645 0.523
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO45304 Homeodomain 1 57
EDO45304 Homeodomain 79 132

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

Invalid Input OrderBy

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action