NEMVEDRAFT_v1g80394 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g80394 T221079_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEMVEDRAFT_v1g80394
M02151_2.00
Nematostella vectensis
NNYWATNHN

NDNATWRNN
PBM
Weirauch et al.(2014)
pTH5904
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CG15696
M02125_2.00
Drosophila melanogaster
NNYWATHNN

NNDATWRNN
PBM
Weirauch et al.(2014)
pTH6445
0.727 0.544
CG15696
M06540_2.00
Drosophila melanogaster
TTRATTR

YAATYAA
B1H
Mathelier et al.(2014)
MA0176.1
0.727 0.544
CG15696
M06356_2.00
Drosophila melanogaster
BTTRATTR

YAATYAAV
B1H
Zhu et al.(2011)
CG15696_Cell_FBgn0038833
0.727 0.544
CG15696
M06357_2.00
Drosophila melanogaster
NHTWATTR

YAATWADN
B1H
Zhu et al.(2011)
CG15696_SOLEXA_FBgn0038833
0.727 0.544
CAD25284
M02053_2.00
Encephalitozoon cuniculi
YTAATTAB

VTAATTAR
PBM
Weirauch et al.(2014)
pTH6265
0.619 0.386
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02151_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
EDO49538 Homeodomain 7 63

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

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44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action