CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g92347
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEMVEDRAFT_v1g92347
T221096_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Duxbl1
M02099_2.00
Mus musculus
NTGATTRNN
NNYAATCAN
PBM
Weirauch et al.(2014)
pTH6453
0.619
0.642
mixl1.S
M02233_2.00
Xenopus laevis
NHTAATTAANN
NNTTAATTADN
PBM
Weirauch et al.(2014)
pTH6163
0.602
0.604
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO45305
Homeodomain
15
67
RRQRTFFSKEQTVILEEAFQYERFPGIQIREKLARELDIDESRIQVWFQNRRS
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEMVEDRAFT_v1g150808
Nematostella vectensis
NEMVEDRAFT_v1g150808
I
0.810
CJA08488
Caenorhabditis japonica
CJA08488
I
0.676
ENSMPUG00000006459
Mustela putorius furo
ENSMPUG00000006459
I
0.665
ENSTSYG00000014223
Tarsius syrichta
ENSTSYG00000014223
I
0.660
PHOX2B
Loxodonta africana
ENSLAFG00000022070
I
0.658
NEMVEDRAFT_v1g48953
Nematostella vectensis
NEMVEDRAFT_v1g48953
I
0.655
NEMVEDRAFT_v1g49015
Nematostella vectensis
NEMVEDRAFT_v1g49015
I
0.655
estExt_fgenesh2_pg.C_600126
Branchiostoma floridae
estExt_fgenesh2_pg.C_600126
I
0.653
NEMVEDRAFT_v1g69041
Nematostella vectensis
NEMVEDRAFT_v1g69041
I
0.649
ENSMLUG00000028989
Myotis lucifugus
ENSMLUG00000028989
I
0.644
LotgiG80580
Lottia gigantea
LotgiG80580
I
0.643
LotgiG100387
Lottia gigantea
LotgiG100387
I
0.643
LotgiG80535
Lottia gigantea
LotgiG80535
I
0.643
LotgiG100384
Lottia gigantea
LotgiG100384
I
0.642
augustus_masked-nMf.1.1.scaf00990-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00990-processed-gene-0.2
I
0.642
AAEL008266
Aedes aegypti
AAEL008266
I
0.642
RSKR_0000220300
Rhabditophanes kr3021
RSKR_0000220300
I
0.641
ENSFALG00000004733
Ficedula albicollis
ENSFALG00000004733
I
0.639
bix1.2.S
Xenopus laevis
XB-GENE-6252895
I
0.633
bix1.1
Xenopus tropicalis
XB-GENE-482521
I
0.632
XP_002941181
Xenopus tropicalis
XP_002941181
I
0.632
Hba_20723
Heterorhabditis bacteriophora
Hba_20723
I
0.632
AAZ04406
Xenopus tropicalis
AAZ04406
I
0.632
AAZ04407
Xenopus tropicalis
AAZ04407
I
0.632
NEMVEDRAFT_v1g93991
Nematostella vectensis
NEMVEDRAFT_v1g93991
I
0.629
NEMVEDRAFT_v1g233675
Nematostella vectensis
NEMVEDRAFT_v1g233675
I
0.629
ASU_04225
Ascaris suum
ASU_04225
I
0.628
ASIM_0000837901
Anisakis simplex
ASIM_0000837901
I
0.628
nOo.2.0.1.g10062
Onchocerca ochengi
nOo.2.0.1.g10062
I
0.628
Bm7522
Brugia malayi
Bm7522
I
0.628
nDi.2.2.2.g00432
Dirofilaria immitis
nDi.2.2.2.g00432
I
0.628
ALUE_0001674701
Ascaris lumbricoides
ALUE_0001674701
I
0.628
WUBG_10381
Wuchereria bancrofti
WUBG_10381
I
0.628
bix1.3.S
Xenopus laevis
XB-GENE-6252030
I
0.628
TCLT_0000189001
Thelazia callipaeda
TCLT_0000189001
I
0.628
EEL_0001067901
Elaeophora elaphi
EEL_0001067901
I
0.628
LOAG_06831
Loa loa
LOAG_06831
I
0.628
nAv.1.0.1.g03426
Acanthocheilonema viteae
nAv.1.0.1.g03426
I
0.628
WBGene00244975
Onchocerca volvulus
WBGene00244975
I
0.628
DME_0000392201
Dracunculus medinensis
DME_0000392201
I
0.628
BTMF_0001439101
Brugia timori
BTMF_0001439101
I
0.628
nLs.2.1.2.g09340
Litomosoides sigmodontis
nLs.2.1.2.g09340
I
0.628
OFLC_0000389601
Onchocerca flexuosa
OFLC_0000389601
I
0.628
bix1.1.L
Xenopus laevis
XB-GENE-6252894
I
0.627
bix1.3.L
Xenopus laevis
XB-GENE-6485514
I
0.627
O9G_003621
Rozella allomycis
O9G_003621
I
0.625
ENSOANG00000003281
Ornithorhynchus anatinus
ENSOANG00000003281
I
0.614
ENSMGAG00000015339
Meleagris gallopavo
ENSMGAG00000015339
I
0.614
sia1.L
Xenopus laevis
XB-GENE-864865
I
0.613
sia2
Xenopus tropicalis
XB-GENE-482070
I
0.613
sia1
Xenopus tropicalis
XB-GENE-482368
I
0.613
CapteG129681
Capitella teleta
CapteG129681
I
0.612
ML12641a
Mnemiopsis leidyi
ML12641a
I
0.611
OTP
Pteropus vampyrus
ENSPVAG00000011630
I
0.608
TRE_0000490001
Trichobilharzia regenti
TRE_0000490001
I
0.607
TTAC_0000844001
Hydatigera taeniaeformis
TTAC_0000844001
I
0.607
RSKR_0000047500
Rhabditophanes kr3021
RSKR_0000047500
I
0.607
ENSGMOG00000015411
Gadus morhua
ENSGMOG00000015411
I
0.604
ENSPSIG00000005438
Pelodiscus sinensis
ENSPSIG00000005438
I
0.604
T265_01068
Opisthorchis viverrini
T265_01068
I
0.603
SCUD_0001719701
Schistosoma curassoni
SCUD_0001719701
I
0.603
MNX1
Homo sapiens
ENSG00000130675
D
0.603
DILT_0000634101
Diphyllobothrium latum
DILT_0000634101
I
0.603
AAZ04405
Xenopus tropicalis
AAZ04405
I
0.602
AAI58894
Xenopus tropicalis
AAI58894
I
0.602
RSKR_0000962500
Rhabditophanes kr3021
RSKR_0000962500
I
0.602
mixl1.S
Xenopus laevis
XB-GENE-865559
D
0.602
mixl1.L
Xenopus laevis
XB-GENE-6254430
I
0.602
mixl1
Xenopus tropicalis
XB-GENE-485898
I
0.602