NEMVEDRAFT_v1g92436 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g92436 T221097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DUXA
M01247_2.00 		Homo sapiens
NTGATTRNN
NNYAATCAN		 PBM
Lambert et al.(2019)
pTH11226 		0.643 0.504
DUXA
M03244_2.00 		Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN		 SELEX
Jolma et al.(2013)
DUXA_1 		0.643 0.504
DUXA
M05402_2.00 		Homo sapiens
TRAYBYAATCA
TGATTRVRTYA		 SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX 		0.643 0.504
DUXA
M10756_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DUXA_02 		0.643 0.504
DUXA
M05403_2.00 		Homo sapiens
YRAYBYAATCA
TGATTRVRTYR		 SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX 		0.643 0.504
DUX4
M08135_2.00 		Homo sapiens
TAAYYYAATCA
TGATTRRRTTA		 ChIP-seq
Mathelier et al.(2014)
MA0468.1 		0.629 0.514
DUX4
M09167_2.00 		Homo sapiens
TAAYYYAATCA
TGATTRRRTTA		 Misc
Kulakovskiy et al.(2013)
DUX4_HUMAN.H11MO.0.A 		0.629 0.514
DUX4
M10757_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DUX4_01 		0.629 0.514
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO45301 Homeodomain 15 71
EDO45301 Homeodomain 91 144

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

Invalid Input OrderBy

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action