CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEPG_00487
(
Nematocida parisii ertm1
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEPG_00487
T221110_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
unc-62
M02185_2.00
Caenorhabditis elegans
NHDAHANNN
NNNTDTHDN
PBM
Weirauch et al.(2014)
pTH5781
0.614
0.500
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EIJ94962
Homeodomain
154
212
SGKRMNYPKTITKILKTWLSKHIDNPYPDEVEKKYLIYKTGLGNTQINNWFINARRRIL
Links
Other
Homeodomain
family TFs
Other
Nematocida parisii ertm1
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HHAL003319-PA
Halyomorpha halys
HHAL003319-PA
I
0.629
LotgiG121570
Lottia gigantea
LotgiG121570
I
0.622
unc-62
Caenorhabditis elegans
WBGene00006796
D
0.614
NCER_101346
Nosema ceranae
NCER_101346
I
0.612
DI09_143p10
Microsporidia sp
DI09_143p10
I
0.612
fgenesh1_pg.scaffold_2000153
Monosiga brevicollis
fgenesh1_pg.scaffold_2000153
N
0.600