CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART02G26000
(
Oryza barthii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
OBART02G26000
T221309_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HOX6
M02157_2.00
Oryza sativa
DTGATTRVNN
NNBYAATCAH
PBM
Weirauch et al.(2014)
pTH6378
0.637
0.738
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART02G26000.1
Homeodomain
24
66
ATTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRS
Links
Other
Homeodomain
family TFs
Other
Oryza barthii
TFs
477 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy