OMERI09G12780 (Oryza meridionalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OMERI09G12780 T221607_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HOX6
M02157_2.00
Oryza sativa
DTGATTRVNN

NNBYAATCAH
PBM
Weirauch et al.(2014)
pTH6378
0.867 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI09G12780.1 Homeodomain 26 81

Links

Other Homeodomain family TFs
Other Oryza meridionalis TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OB09G23870 Oryza brachyantha OB09G23870 I 0.867
TRIUR3_11780 Triticum urartu TRIUR3_11780 I 0.867
F775_30991 Aegilops tauschii F775_30991 I 0.867
OPUNC09G15600 Oryza punctata OPUNC09G15600 I 0.867
MLOC_69710 Hordeum vulgare MLOC_69710 I 0.867
LPERR09G13180 Leersia perrieri LPERR09G13180 I 0.867
Traes_5DL_96F9EED93 Triticum aestivum Traes_5DL_96F9EED93 I 0.867
Traes_5BL_9C32B27E2 Triticum aestivum Traes_5BL_9C32B27E2 I 0.867
HOX6 Oryza sativa OS09G0528200 D 0.867
GSMUA_Achr1G16280_001 Musa acuminata GSMUA_Achr1G16280_001 I 0.732
SapurV1A.2485s0010 Salix purpurea SapurV1A.2485s0010 I 0.704
SapurV1A.0617s0090 Salix purpurea SapurV1A.0617s0090 I 0.704
LPERR09G05860 Leersia perrieri LPERR09G05860 I 0.703
GSMUA_Achr1G18670_001 Musa acuminata GSMUA_Achr1G18670_001 I 0.674
Eucgr.I02464 Eucalyptus grandis Eucgr.I02464 I 0.673
Traes_2AL_BFB0C6D4C Triticum aestivum Traes_2AL_BFB0C6D4C I 0.637
OBART02G26000 Oryza barthii OBART02G26000 I 0.637
OS04G0541700 Oryza sativa OS04G0541700 I 0.637
TRIUR3_22395 Triticum urartu TRIUR3_22395 I 0.629
Cucsa.259560 Cucumis sativus Cucsa.259560 I 0.627
Cla021437 Citrullus lanatus Cla021437 I 0.627
Pavir.J34132 Panicum virgatum Pavir.J34132 I 0.625
Pavir.J33909 Panicum virgatum Pavir.J33909 I 0.625
OLONG_017897 Oryza longistaminata OLONG_017897 I 0.623
Eucgr.D02645 Eucalyptus grandis Eucgr.D02645 I 0.621