ONIVA04G25940 (Oryza nivara)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ONIVA04G25940 T221655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.751 0.649
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.751 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G25940.1 Homeodomain 89 150

Links

Other Homeodomain family TFs
Other Oryza nivara TFs

448 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g06574 Acanthocheilonema viteae nAv.1.0.1.g06574 N 0.000
ASU_07704 Ascaris suum ASU_07704 N 0.000
Bm1894 Brugia malayi Bm1894 N 0.000
BTMF_0001408601 Brugia timori BTMF_0001408601 N 0.000
nDi.2.2.2.g04749 Dirofilaria immitis nDi.2.2.2.g04749 N 0.000
EEL_0000930001 Elaeophora elaphi EEL_0000930001 N 0.000
EVEC_0001019201 Enterobius vermicularis EVEC_0001019201 N 0.000
nLs.2.1.2.g06426 Litomosoides sigmodontis nLs.2.1.2.g06426 N 0.000
LOAG_10033 Loa loa LOAG_10033 N 0.000
nOo.2.0.1.g08128 Onchocerca ochengi nOo.2.0.1.g08128 N 0.000
WBGene00246733 Onchocerca volvulus WBGene00246733 N 0.000
SMUV_0000583701 Syphacia muris SMUV_0000583701 N 0.000
TCNE_0001749201 Toxocara canis TCNE_0001749201 N 0.000
WUBG_07288 Wuchereria bancrofti WUBG_07288 N 0.000