HOS66 (Oryza sativa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OS03G0123500 T221995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOS66
M02156_2.00		 Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.830 0.808
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.830 0.808
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.828 0.865
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.686 0.462
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.628 0.385
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.628 0.385
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.628 0.385
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.628 0.385
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02156_2.00 Homeodomain 51 105

DNA Binding Domains

Protein ID Domain From To Sequence
OS03T0123500-01 Homeodomain 219 273
OS03T0123500-02 Homeodomain 246 300

Links

Other Homeodomain family TFs
Other Oryza sativa TFs

Invalid Input OrderBy

467 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action