PGSC0003DMG400010725 (Solanum tuberosum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PGSC0003DMG400010725 T222167_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WOX11
M06916_2.00
Arabidopsis thaliana
ADTTAATTAVD

HBTAATTAAHT
Dap-seq
OMalley et al.(2016)
WOX11_col_a
0.726 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400027850 Homeodomain 21 82

Links

Other Homeodomain family TFs
Other Solanum tuberosum TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.000
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.000
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.000
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.000
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.000
OBART01G33150 Oryza barthii OBART01G33150 N 0.000
OB01G42000 Oryza brachyantha OB01G42000 N 0.000
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.000
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.000
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.000
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.000
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.000
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.000
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.000
OS01G0780800 Oryza sativa OS01G0780800 N 0.000
29983.m003255 Ricinus communis 29983.m003255 N 0.000
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.000