PGSC0003DMG400024157 (Solanum tuberosum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PGSC0003DMG400024157 T222202_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN

NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.825 0.860
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW

WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.825 0.860
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN

NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.825 0.860
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT

AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.812 0.825
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN

NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.792 0.789
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD

HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.792 0.789
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN

NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.778 0.719
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV

BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.778 0.719
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN

NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.745 0.789
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN

NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.745 0.789
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV

BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.745 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400062081 Homeodomain 134 190

Links

Other Homeodomain family TFs
Other Solanum tuberosum TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL009212 Aedes aegypti AAEL009212 I 0.000
AATE008285 Anopheles atroparvus AATE008285 N 0.000
ACEP17037 Atta cephalotes ACEP17037 N 0.000
ACUA004154 Anopheles culicifacies ACUA004154 N 0.000
ADIR004657 Anopheles dirus ADIR004657 N 0.000
AGAP005245 Anopheles gambiae AGAP005245 N 0.000
ASIS018105 Anopheles sinensis ASIS018105 N 0.000
ASTEI05993 Anopheles stephensi ASTEI05993 N 0.000
Cflo_10046--XP_001120340.1_APIME Camponotus floridanus Cflo_10046--XP_001120340.1_APIME N 0.000
CLEC025019 Cimex lectularius CLEC025019 N 0.000
GB53480 Apis mellifera GB53480 N 0.000
GD25971 Drosophila simulans FBgn0197248 N 0.000
GE13093 Drosophila yakuba FBgn0230795 N 0.000
GF11097 Drosophila ananassae FBgn0088137 N 0.000
GG22734 Drosophila erecta FBgn0114899 N 0.000
GH20622 Drosophila grimshawi FBgn0128085 N 0.000
GI20183 Drosophila mojavensis FBgn0142919 N 0.000
GJ20133 Drosophila virilis FBgn0207273 N 0.000
GL17193 Drosophila persimilis FBgn0154796 N 0.000
GM20512 Drosophila sechellia FBgn0175394 N 0.000
LCUP002990 Lucilia cuprina LCUP002990 N 0.000
NV30904 Nasonia vitripennis NV30904 N 0.000
RPRC014104 Rhodnius prolixus RPRC014104 N 0.000