PGSC0003DMG400025358 (Solanum tuberosum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PGSC0003DMG400025358 T222205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.654 0.614
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.654 0.614
WOX13
M02049_2.00
Arabidopsis thaliana
YTGATTGA

TCAATCAR
PBM
Weirauch et al.(2014)
pTH6461
0.637 0.404
WOX13
M00866_2.00
Arabidopsis thaliana
NNTGATTGAN

NTCAATCANN
PBM
Franco-Zorrilla et al.(2014)
WOX13
0.637 0.404
GRMZM2G038252
M02137_2.00
Zea mays
HTRATTGV

BCAATYAD
PBM
Weirauch et al.(2014)
pTH6141
0.637 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400065247 Homeodomain 2 63

Links

Other Homeodomain family TFs
Other Solanum tuberosum TFs

Invalid Input OrderBy

576 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action