CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phatr3_EG01287
(
Phaeodactylum tricornutum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Phatr3_EG01287
T222253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phatr3_EG01287.p1
Homeodomain
81
124
LLSPEHFTHPYPTPQDQVMLMQKTGIDKKQLKNWFTNARRRIWK
Links
Other
Homeodomain
family TFs
Other
Phaeodactylum tricornutum
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.23.557.1
Fragilariopsis cylindrus
gw1.23.557.1
N
0.808
CapteG207287
Capitella teleta
CapteG207287
N
0.727
LotgiG111066
Lottia gigantea
LotgiG111066
N
0.717
HelroG148509
Helobdella robusta
HelroG148509
N
0.715
PK11392.1
Cannabis sativa
PK11392.1
N
0.711
M422DRAFT_216079
Sphaerobolus stellatus
M422DRAFT_216079
N
0.698
M422DRAFT_215883
Sphaerobolus stellatus
M422DRAFT_215883
N
0.698
M407DRAFT_19124
Tulasnella calospora
M407DRAFT_19124
N
0.696
e_gw1.484.13.1
Dictyostelium purpureum
e_gw1.484.13.1
N
0.694
HMPREF1120_03855
Exophiala dermatitidis
HMPREF1120_03855
N
0.686
CapteG218681
Capitella teleta
CapteG218681
N
0.682
SERLA73DRAFT_156557
Serpula lacrymans
SERLA73DRAFT_156557
N
0.676
Ocbimv22005149m.g
Octopus bimaculoides
Ocbimv22005149m.g
N
0.670
CHGG_03334
Chaetomium globosum
CHGG_03334
N
0.667
CGI_10008335
Crassostrea gigas
CGI_10008335
N
0.662
SNAPOd2T00010075001
Oikopleura dioica
SNAPOd2T00010075001
N
0.618
M413DRAFT_208768
Hebeloma cylindrosporum
M413DRAFT_208768
N
0.615
CHLREDRAFT_186803
Chlamydomonas reinhardtii
CHLREDRAFT_186803
N
0.600